RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 CACNA1SQ13698 1873 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 SNAP23O00161 211 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 UFL1O94874 794 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 SDSP20132 328 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 CCDC102BQ68D86 513 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 BOLA2Q9H3K6 86 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
SNX1-203ENST00000558040 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
SNX1-203ENST00000558040 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 MPNDQ8N594 471 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 HAUS7Q99871 368 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
SNX1-203ENST00000558040 KCNA3P22001 575 aa20.52■□□□□ 0.88
SNX1-203ENST00000558040 ARID4AP29374 1257 aaPredicted RBP20.52■□□□□ 0.88
SNX1-203ENST00000558040 PHKA1P46020 1223 aa20.52■□□□□ 0.88
SNX1-203ENST00000558040 DPP8Q6V1X1 898 aaPredicted RBP20.52■□□□□ 0.88
SNX1-203ENST00000558040 C15orf52Q6ZUT6 534 aaKnown RBP20.52■□□□□ 0.88
SNX1-203ENST00000558040 EVI5LQ96CN4 794 aa20.52■□□□□ 0.88
SNX1-203ENST00000558040 LTBP1Q14766 1721 aa20.51■□□□□ 0.87
SNX1-203ENST00000558040 CDC45O75419 566 aa20.51■□□□□ 0.87
SNX1-203ENST00000558040 SOGA3Q5TF21 947 aa20.51■□□□□ 0.87
SNX1-203ENST00000558040 CASC1Q6TDU7 716 aa20.51■□□□□ 0.87
SNX1-203ENST00000558040 TBC1D16Q8TBP0 767 aa20.51■□□□□ 0.87
SNX1-203ENST00000558040 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
SNX1-203ENST00000558040 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 SOCS7O14512 581 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 MAP4K4O95819 1239 aaPredicted RBP20.5■□□□□ 0.87
SNX1-203ENST00000558040 BCAMP50895 628 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 ZNF804AQ7Z570 1209 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 SLC51AQ86UW1 340 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
SNX1-203ENST00000558040 MED23Q9ULK4 1368 aa20.49■□□□□ 0.87
SNX1-203ENST00000558040 HIBADHP31937 336 aaKnown RBP20.49■□□□□ 0.87
SNX1-203ENST00000558040 GYG1P46976 350 aa20.49■□□□□ 0.87
SNX1-203ENST00000558040 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
SNX1-203ENST00000558040 FBXO33Q7Z6M2 555 aa20.49■□□□□ 0.87
SNX1-203ENST00000558040 FAM84BQ96KN1 310 aaPredicted RBP20.49■□□□□ 0.87
SNX1-203ENST00000558040 EYA3Q99504 573 aa20.49■□□□□ 0.87
SNX1-203ENST00000558040 WTIPA6NIX2 430 aaPredicted RBP20.48■□□□□ 0.87
SNX1-203ENST00000558040 SEMA3EO15041 775 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 KLRK1P26718 216 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 MCAMP43121 646 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 C8orf34Q49A92 452 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 PAG1Q9NWQ8 432 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
SNX1-203ENST00000558040 POLLQ9UGP5 575 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
SNX1-203ENST00000558040 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 ZBTB22O15209 634 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 C21orf2O43822 256 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
SNX1-203ENST00000558040 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
SNX1-203ENST00000558040 TTF1Q15361 905 aaPredicted RBP20.47■□□□□ 0.87
SNX1-203ENST00000558040 OLFM4Q6UX06 510 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 SUPT20HQ8NEM7 779 aa20.47■□□□□ 0.87
SNX1-203ENST00000558040 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 HIP1O00291 1037 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 GOLIM4O00461 696 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
SNX1-203ENST00000558040 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 SCARF1Q14162 830 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 TICAM2Q86XR7 235 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
SNX1-203ENST00000558040 DENND2AQ9ULE3 1009 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
SNX1-203ENST00000558040 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
SNX1-203ENST00000558040 ZAP70P43403 619 aa20.45■□□□□ 0.86
SNX1-203ENST00000558040 LRRFIP1Q32MZ4 808 aaKnown RBP20.45■□□□□ 0.86
SNX1-203ENST00000558040 BACH2Q9BYV9 841 aa20.45■□□□□ 0.86
SNX1-203ENST00000558040 ZC3H12CQ9C0D7 883 aaKnown RBP20.45■□□□□ 0.86
SNX1-203ENST00000558040 SNRKQ9NRH2 765 aa20.45■□□□□ 0.86
SNX1-203ENST00000558040 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
SNX1-203ENST00000558040 PDS5AQ29RF7 1337 aaKnown RBP20.45■□□□□ 0.86
SNX1-203ENST00000558040 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 TBC1D9Q6ZT07 1266 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 TXNRD3Q86VQ6 643 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 KBTBD3Q8NAB2 608 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 GPR101Q96P66 508 aaPredicted RBP20.44■□□□□ 0.86
SNX1-203ENST00000558040 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
SNX1-203ENST00000558040 PI16Q6UXB8 463 aa20.43■□□□□ 0.86
SNX1-203ENST00000558040 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
SNX1-203ENST00000558040 DIAPH3Q9NSV4 1193 aa20.43■□□□□ 0.86
SNX1-203ENST00000558040 AKAP11Q9UKA4 1901 aa20.43■□□□□ 0.86
SNX1-203ENST00000558040 CHMLP26374 656 aa20.42■□□□□ 0.86
SNX1-203ENST00000558040 NLGN2Q8NFZ4 835 aa20.42■□□□□ 0.86
SNX1-203ENST00000558040 PSMD1Q99460 953 aa20.42■□□□□ 0.86
SNX1-203ENST00000558040 FHDC1Q9C0D6 1143 aaPredicted RBP20.42■□□□□ 0.86
SNX1-203ENST00000558040 COA1Q9GZY4 146 aa20.42■□□□□ 0.86
SNX1-203ENST00000558040 IQSEC3Q9UPP2 1182 aaPredicted RBP20.42■□□□□ 0.86
SNX1-203ENST00000558040 G3V3G9 751 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms