RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.91
PBX4-202ENST00000557978 COA1Q9GZY4 146 aa20.77■□□□□ 0.91
PBX4-202ENST00000557978 ZNF541Q9H0D2 1346 aa20.77■□□□□ 0.91
PBX4-202ENST00000557978 CXCL9Q07325 125 aa20.76■□□□□ 0.91
PBX4-202ENST00000557978 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
PBX4-202ENST00000557978 GJA3Q9Y6H8 435 aa20.76■□□□□ 0.91
PBX4-202ENST00000557978 YDJCA8MPS7 323 aa20.75■□□□□ 0.91
PBX4-202ENST00000557978 SNAP23O00161 211 aa20.75■□□□□ 0.91
PBX4-202ENST00000557978 HMMRO75330 724 aa20.75■□□□□ 0.91
PBX4-202ENST00000557978 PUM3Q15397 648 aaKnown RBP20.75■□□□□ 0.91
PBX4-202ENST00000557978 ZNF804AQ7Z570 1209 aa20.75■□□□□ 0.91
PBX4-202ENST00000557978 TXNRD3Q86VQ6 643 aa20.75■□□□□ 0.91
PBX4-202ENST00000557978 ARAP2Q8WZ64 1704 aa20.74■□□□□ 0.91
PBX4-202ENST00000557978 IRS2Q9Y4H2 1338 aa20.73■□□□□ 0.91
PBX4-202ENST00000557978 RAD17O75943 681 aa20.73■□□□□ 0.91
PBX4-202ENST00000557978 IFIT1P09914 478 aaKnown RBP20.73■□□□□ 0.91
PBX4-202ENST00000557978 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
PBX4-202ENST00000557978 KLRK1P26718 216 aa20.73■□□□□ 0.91
PBX4-202ENST00000557978 L3MBTL3Q96JM7 780 aaPredicted RBP20.73■□□□□ 0.91
PBX4-202ENST00000557978 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
PBX4-202ENST00000557978 ZNF646O15015 1829 aaPredicted RBP20.73■□□□□ 0.91
PBX4-202ENST00000557978 IQCA1LA6NCM1 817 aa20.72■□□□□ 0.91
PBX4-202ENST00000557978 SURF6O75683 361 aaKnown RBP20.72■□□□□ 0.91
PBX4-202ENST00000557978 SLC5A1P13866 664 aa20.72■□□□□ 0.91
PBX4-202ENST00000557978 CAVIN4Q5BKX8 364 aa20.72■□□□□ 0.91
PBX4-202ENST00000557978 LPIN2Q92539 896 aa20.72■□□□□ 0.91
PBX4-202ENST00000557978 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
PBX4-202ENST00000557978 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
PBX4-202ENST00000557978 FGFR2P21802 821 aa20.71■□□□□ 0.91
PBX4-202ENST00000557978 OS9Q13438 667 aaPredicted RBP20.71■□□□□ 0.91
PBX4-202ENST00000557978 CD209Q9NNX6 404 aa20.71■□□□□ 0.91
PBX4-202ENST00000557978 NMRK2Q9NPI5 230 aa20.71■□□□□ 0.91
PBX4-202ENST00000557978 HIBADHP31937 336 aaKnown RBP20.7■□□□□ 0.9
PBX4-202ENST00000557978 AAMPQ13685 434 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 ATP2B3Q16720 1220 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 VPS37DQ86XT2 251 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 CRBNQ96SW2 442 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 PSMD14O00487 310 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 IL1R1P14778 569 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 LMOD1P29536 600 aaPredicted RBP20.7■□□□□ 0.9
PBX4-202ENST00000557978 TFCP2Q12800 502 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 FAM84BQ96KN1 310 aaPredicted RBP20.7■□□□□ 0.9
PBX4-202ENST00000557978 KCNQ5Q9NR82 932 aa20.7■□□□□ 0.9
PBX4-202ENST00000557978 USP17L3A6NCW0 530 aa20.69■□□□□ 0.9
PBX4-202ENST00000557978 USP17L4A6NCW7 530 aa20.69■□□□□ 0.9
PBX4-202ENST00000557978 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
PBX4-202ENST00000557978 USP17L1Q7RTZ2 530 aa20.69■□□□□ 0.9
PBX4-202ENST00000557978 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
PBX4-202ENST00000557978 HACL1Q9UJ83 578 aa20.69■□□□□ 0.9
PBX4-202ENST00000557978 POTECB2RU33 542 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 RPS12P25398 132 aaKnown RBP20.68■□□□□ 0.9
PBX4-202ENST00000557978 GYG1P46976 350 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 STRIP1Q5VSL9 837 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 TTLL5Q6EMB2 1281 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 SIRT2Q8IXJ6 389 aa20.68■□□□□ 0.9
PBX4-202ENST00000557978 SASH1O94885 1247 aa20.67■□□□□ 0.9
PBX4-202ENST00000557978 DPF2Q92785 391 aa20.67■□□□□ 0.9
PBX4-202ENST00000557978 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
PBX4-202ENST00000557978 MYO3BQ8WXR4 1341 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 A0A1B0GUL7 405 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 KIF3CO14782 793 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 GMPSP49915 693 aaPredicted RBP20.66■□□□□ 0.9
PBX4-202ENST00000557978 SCNN1DP51172 638 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 FBXO33Q7Z6M2 555 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 AGBL3Q8NEM8 1001 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 FBXW7Q969H0 707 aa20.66■□□□□ 0.9
PBX4-202ENST00000557978 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
PBX4-202ENST00000557978 FRAT2O75474 233 aaPredicted RBP20.65■□□□□ 0.9
PBX4-202ENST00000557978 GTF2IP78347 998 aa20.65■□□□□ 0.9
PBX4-202ENST00000557978 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
PBX4-202ENST00000557978 TDRD7Q8NHU6 1098 aaKnown RBP20.65■□□□□ 0.9
PBX4-202ENST00000557978 GPRC5DQ9NZD1 345 aa20.65■□□□□ 0.9
PBX4-202ENST00000557978 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
PBX4-202ENST00000557978 ZBTB12Q9Y330 459 aaPredicted RBP20.65■□□□□ 0.9
PBX4-202ENST00000557978 ZNF609O15014 1411 aa20.65■□□□□ 0.9
PBX4-202ENST00000557978 TIMM10P62072 90 aa20.64■□□□□ 0.89
PBX4-202ENST00000557978 PNMA8AQ86V59 439 aaPredicted RBP20.64■□□□□ 0.89
PBX4-202ENST00000557978 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
PBX4-202ENST00000557978 GNL3LQ9NVN8 582 aaKnown RBP20.64■□□□□ 0.89
PBX4-202ENST00000557978 H7C1D1 291 aa20.63■□□□□ 0.89
PBX4-202ENST00000557978 EPHX2P34913 555 aa20.63■□□□□ 0.89
PBX4-202ENST00000557978 BCAMP50895 628 aa20.63■□□□□ 0.89
PBX4-202ENST00000557978 DACT2Q5SW24 774 aa20.63■□□□□ 0.89
PBX4-202ENST00000557978 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
PBX4-202ENST00000557978 CNOT7Q9UIV1 285 aaKnown RBP20.63■□□□□ 0.89
PBX4-202ENST00000557978 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
PBX4-202ENST00000557978 TOMM70O94826 608 aa20.62■□□□□ 0.89
PBX4-202ENST00000557978 MMP14P50281 582 aa20.62■□□□□ 0.89
PBX4-202ENST00000557978 FKBP1AP62942 108 aaKnown RBP20.62■□□□□ 0.89
PBX4-202ENST00000557978 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
PBX4-202ENST00000557978 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
PBX4-202ENST00000557978 FAM205AQ6ZU69 1335 aa20.62■□□□□ 0.89
PBX4-202ENST00000557978 EPS15P42566 896 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 KIF1BPQ96EK5 621 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 PCDHB15Q9Y5E8 787 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 TNNI3KQ59H18 835 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 GORABQ5T7V8 394 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 USP50Q70EL3 339 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms