RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
USP3-205ENST00000557884 IRS2Q9Y4H2 1338 aa17.78■□□□□ 0.44
USP3-205ENST00000557884 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
USP3-205ENST00000557884 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
USP3-205ENST00000557884 OS9Q13438 667 aaPredicted RBP17.78■□□□□ 0.44
USP3-205ENST00000557884 PUM3Q15397 648 aaKnown RBP17.78■□□□□ 0.44
USP3-205ENST00000557884 CIAPIN1Q6FI81 312 aa17.78■□□□□ 0.44
USP3-205ENST00000557884 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
USP3-205ENST00000557884 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
USP3-205ENST00000557884 GYG1P46976 350 aa17.77■□□□□ 0.44
USP3-205ENST00000557884 TFCP2Q12800 502 aa17.77■□□□□ 0.44
USP3-205ENST00000557884 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
USP3-205ENST00000557884 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.44
USP3-205ENST00000557884 GPC2Q8N158 579 aa17.77■□□□□ 0.44
USP3-205ENST00000557884 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
USP3-205ENST00000557884 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
USP3-205ENST00000557884 PSMD14O00487 310 aa17.76■□□□□ 0.43
USP3-205ENST00000557884 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
USP3-205ENST00000557884 FGFR2P21802 821 aa17.76■□□□□ 0.43
USP3-205ENST00000557884 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
USP3-205ENST00000557884 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
USP3-205ENST00000557884 ZNF804AQ7Z570 1209 aa17.76■□□□□ 0.43
USP3-205ENST00000557884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
USP3-205ENST00000557884 DICER1Q9UPY3 1922 aaKnown RBP17.75■□□□□ 0.43
USP3-205ENST00000557884 HMMRO75330 724 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 SLC5A1P13866 664 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
USP3-205ENST00000557884 TNIP1Q15025 636 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 PODNQ7Z5L7 613 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 LPIN2Q92539 896 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 CD209Q9NNX6 404 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
USP3-205ENST00000557884 POTECB2RU33 542 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 SASH1O94885 1247 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
USP3-205ENST00000557884 VPS37DQ86XT2 251 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 EXOC6Q8TAG9 804 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 FAM84BQ96KN1 310 aaPredicted RBP17.74■□□□□ 0.43
USP3-205ENST00000557884 JAG2Q9Y219 1238 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
USP3-205ENST00000557884 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
USP3-205ENST00000557884 A0A1B0GUL6 1792 aa17.74■□□□□ 0.43
USP3-205ENST00000557884 ADORA1P30542 326 aa17.73■□□□□ 0.43
USP3-205ENST00000557884 BCAMP50895 628 aa17.73■□□□□ 0.43
USP3-205ENST00000557884 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
USP3-205ENST00000557884 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
USP3-205ENST00000557884 MXD3Q9BW11 206 aa17.73■□□□□ 0.43
USP3-205ENST00000557884 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
USP3-205ENST00000557884 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
USP3-205ENST00000557884 USP17L3A6NCW0 530 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 USP17L4A6NCW7 530 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 APBB1O00213 710 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 KIF3CO14782 793 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
USP3-205ENST00000557884 SCNN1DP51172 638 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 TIMM10P62072 90 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 GTF2IP78347 998 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 CAVIN4Q5BKX8 364 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 USP17L1Q7RTZ2 530 aa17.72■□□□□ 0.43
USP3-205ENST00000557884 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
USP3-205ENST00000557884 IL1R1P14778 569 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 LMOD1P29536 600 aaPredicted RBP17.71■□□□□ 0.43
USP3-205ENST00000557884 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
USP3-205ENST00000557884 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
USP3-205ENST00000557884 EPS15P42566 896 aa17.7■□□□□ 0.42
USP3-205ENST00000557884 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
USP3-205ENST00000557884 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
USP3-205ENST00000557884 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
USP3-205ENST00000557884 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
USP3-205ENST00000557884 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
USP3-205ENST00000557884 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
USP3-205ENST00000557884 STRIP1Q5VSL9 837 aa17.69■□□□□ 0.42
USP3-205ENST00000557884 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
USP3-205ENST00000557884 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
USP3-205ENST00000557884 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
USP3-205ENST00000557884 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
USP3-205ENST00000557884 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
USP3-205ENST00000557884 ZNF609O15014 1411 aa17.69■□□□□ 0.42
USP3-205ENST00000557884 EPHX2P34913 555 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 PHKA1P46020 1223 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
USP3-205ENST00000557884 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
USP3-205ENST00000557884 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
USP3-205ENST00000557884 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
USP3-205ENST00000557884 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
USP3-205ENST00000557884 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
USP3-205ENST00000557884 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
USP3-205ENST00000557884 SCN9AQ15858 1988 aa17.67■□□□□ 0.42
USP3-205ENST00000557884 H7C1D1 291 aa17.66■□□□□ 0.42
USP3-205ENST00000557884 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
USP3-205ENST00000557884 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms