RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 RTFDC1Q9BY42 306 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-213ENST00000557765 ANKIB1Q9P2G1 1089 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 SDSP20132 328 aa12.74□□□□□ -0.37
GABRB3-213ENST00000557765 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
GABRB3-213ENST00000557765 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-213ENST00000557765 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
GABRB3-213ENST00000557765 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
GABRB3-213ENST00000557765 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 GSPT1P15170 499 aaKnown RBP12.73□□□□□ -0.37
GABRB3-213ENST00000557765 TIMM10P62072 90 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
GABRB3-213ENST00000557765 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-213ENST00000557765 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 FBXO33Q7Z6M2 555 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-213ENST00000557765 TBC1D22AQ8WUA7 517 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-213ENST00000557765 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 PAG1Q9NWQ8 432 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
GABRB3-213ENST00000557765 A0A1B0GUL6 1792 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 HIBADHP31937 336 aaKnown RBP12.72□□□□□ -0.37
GABRB3-213ENST00000557765 C8orf34Q49A92 452 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 MPNDQ8N594 471 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 PSMD1Q99460 953 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 COA1Q9GZY4 146 aa12.72□□□□□ -0.37
GABRB3-213ENST00000557765 NT5C2P49902 561 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.37
GABRB3-213ENST00000557765 MAP3K12Q12852 859 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.37
GABRB3-213ENST00000557765 DPP8Q6V1X1 898 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-213ENST00000557765 PODNQ7Z5L7 613 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
GABRB3-213ENST00000557765 NSFL1CQ9UNZ2 370 aaKnown RBP12.71□□□□□ -0.37
GABRB3-213ENST00000557765 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
GABRB3-213ENST00000557765 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-213ENST00000557765 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
GABRB3-213ENST00000557765 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-213ENST00000557765 IL1R1P14778 569 aa12.7□□□□□ -0.38
GABRB3-213ENST00000557765 UBE3CQ15386 1083 aa12.7□□□□□ -0.38
GABRB3-213ENST00000557765 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
GABRB3-213ENST00000557765 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-213ENST00000557765 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
GABRB3-213ENST00000557765 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
GABRB3-213ENST00000557765 MCCP23508 829 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 CHMLP26374 656 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 TBC1D16Q8TBP0 767 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 RILPL2Q969X0 211 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
GABRB3-213ENST00000557765 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
GABRB3-213ENST00000557765 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-213ENST00000557765 MAST3O60307 1309 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 TAF5LO75529 589 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 UFL1O94874 794 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 ZBTB7AO95365 584 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 PTGER2P43116 358 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 ANAPC15P60006 121 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
GABRB3-213ENST00000557765 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
GABRB3-213ENST00000557765 MRIQ9BWK5 157 aa12.68□□□□□ -0.38
GABRB3-213ENST00000557765 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
GABRB3-213ENST00000557765 FAM205AQ6ZU69 1335 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-213ENST00000557765 GNAT2P19087 354 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 GSTO1P78417 241 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 GPSM2P81274 684 aa12.67□□□□□ -0.38
GABRB3-213ENST00000557765 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
GABRB3-213ENST00000557765 SGSM2O43147 1006 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 MCAMP43121 646 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 PHKA1P46020 1223 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
GABRB3-213ENST00000557765 KIAA2012Q0VF49 1180 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-213ENST00000557765 APPBP2Q92624 585 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 IL17RAQ96F46 866 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
GABRB3-213ENST00000557765 ZMYM6O95789 1325 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms