RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 C1orf115Q9H7X2 142 aa16.93■□□□□ 0.3
SHMT2-234ENST00000557703 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 ECE2O60344 883 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-234ENST00000557703 SIL1Q9H173 461 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-234ENST00000557703 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
SHMT2-234ENST00000557703 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
SHMT2-234ENST00000557703 ZNF609O15014 1411 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 IL1R1P14778 569 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-234ENST00000557703 CXCL9Q07325 125 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 STRIP1Q5VSL9 837 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 SLC51AQ86UW1 340 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 ZNF784Q8NCA9 323 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-234ENST00000557703 DPF2Q92785 391 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
SHMT2-234ENST00000557703 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 SASH1O94885 1247 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
SHMT2-234ENST00000557703 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
SHMT2-234ENST00000557703 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-234ENST00000557703 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 AGBL3Q8NEM8 1001 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
SHMT2-234ENST00000557703 GNL3LQ9NVN8 582 aaKnown RBP16.9■□□□□ 0.3
SHMT2-234ENST00000557703 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
SHMT2-234ENST00000557703 SEMA3EO15041 775 aa16.89■□□□□ 0.29
SHMT2-234ENST00000557703 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
SHMT2-234ENST00000557703 SIRT2Q8IXJ6 389 aa16.89■□□□□ 0.29
SHMT2-234ENST00000557703 FAM84BQ96KN1 310 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-234ENST00000557703 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
SHMT2-234ENST00000557703 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
SHMT2-234ENST00000557703 DOK7Q18PE1 504 aa16.88■□□□□ 0.29
SHMT2-234ENST00000557703 TXNRD3Q86VQ6 643 aa16.88■□□□□ 0.29
SHMT2-234ENST00000557703 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
SHMT2-234ENST00000557703 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
SHMT2-234ENST00000557703 IGSF3O75054 1194 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-234ENST00000557703 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-234ENST00000557703 TFCP2Q12800 502 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 TTLL5Q6EMB2 1281 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 PNMA8AQ86V59 439 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-234ENST00000557703 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 COL4A5P29400 1685 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
SHMT2-234ENST00000557703 SCN4AP35499 1836 aa16.86■□□□□ 0.29
SHMT2-234ENST00000557703 WTIPA6NIX2 430 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-234ENST00000557703 HDAC1Q13547 482 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-234ENST00000557703 GPR101Q96P66 508 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-234ENST00000557703 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
SHMT2-234ENST00000557703 HACL1Q9UJ83 578 aa16.86■□□□□ 0.29
SHMT2-234ENST00000557703 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
SHMT2-234ENST00000557703 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
SHMT2-234ENST00000557703 A0A1B0GUL7 405 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 SNAP23O00161 211 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 PSMD14O00487 310 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 RAD17O75943 681 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-234ENST00000557703 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
SHMT2-234ENST00000557703 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 GPRC5DQ9NZD1 345 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
SHMT2-234ENST00000557703 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
SHMT2-234ENST00000557703 H7C1D1 291 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 KLRK1P26718 216 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-234ENST00000557703 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-234ENST00000557703 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 PSME4Q14997 1843 aa16.84■□□□□ 0.29
SHMT2-234ENST00000557703 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-234ENST00000557703 GYG1P46976 350 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 TIMM10P62072 90 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 DACT2Q5SW24 774 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-234ENST00000557703 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 XAGE2Q96GT9 111 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 GMLQ99445 158 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 RRAGCQ9HB90 399 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.28
SHMT2-234ENST00000557703 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
SHMT2-234ENST00000557703 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-234ENST00000557703 BCAMP50895 628 aa16.82■□□□□ 0.28
SHMT2-234ENST00000557703 SCNN1DP51172 638 aa16.82■□□□□ 0.28
SHMT2-234ENST00000557703 GTF2IP78347 998 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms