RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
GPHN-215ENST00000557654 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
GPHN-215ENST00000557654 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
GPHN-215ENST00000557654 AMOTL2Q9Y2J4 779 aa9.32□□□□□ -0.92
GPHN-215ENST00000557654 PROCP04070 461 aa9.31□□□□□ -0.92
GPHN-215ENST00000557654 SELPP16109 830 aa9.31□□□□□ -0.92
GPHN-215ENST00000557654 PEAR1Q5VY43 1037 aaPredicted RBP9.31□□□□□ -0.92
GPHN-215ENST00000557654 OSMRQ99650 979 aa9.31□□□□□ -0.92
GPHN-215ENST00000557654 LINC01387J3KSC0 135 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 APBA3O96018 575 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 ELNP15502 786 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 MAPK1P28482 360 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 PDE3BQ13370 1112 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 TMC7Q7Z402 723 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 RBCK1Q9BYM8 510 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
GPHN-215ENST00000557654 PDE2AO00408 941 aaPredicted RBP9.29□□□□□ -0.92
GPHN-215ENST00000557654 MSTNO14793 375 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 EPHA1P21709 976 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 CDC27P30260 824 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 CITED4Q96RK1 184 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
GPHN-215ENST00000557654 EDN3P14138 238 aa9.28□□□□□ -0.92
GPHN-215ENST00000557654 SETDB1Q15047 1291 aa9.28□□□□□ -0.92
GPHN-215ENST00000557654 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
GPHN-215ENST00000557654 METTL12A8MUP2 240 aa9.27□□□□□ -0.93
GPHN-215ENST00000557654 PTPRAP18433 802 aa9.27□□□□□ -0.93
GPHN-215ENST00000557654 NXPE3Q969Y0 559 aa9.27□□□□□ -0.93
GPHN-215ENST00000557654 CARD10Q9BWT7 1032 aa9.27□□□□□ -0.93
GPHN-215ENST00000557654 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
GPHN-215ENST00000557654 GALNT12Q8IXK2 581 aa9.26□□□□□ -0.93
GPHN-215ENST00000557654 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
GPHN-215ENST00000557654 GALNT11Q8NCW6 608 aa9.26□□□□□ -0.93
GPHN-215ENST00000557654 ADAM19Q9H013 955 aa9.26□□□□□ -0.93
GPHN-215ENST00000557654 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
GPHN-215ENST00000557654 A0A1W2PP55 124 aa9.25□□□□□ -0.93
GPHN-215ENST00000557654 CPNE3O75131 537 aaKnown RBP9.25□□□□□ -0.93
GPHN-215ENST00000557654 IGHA1P01876 353 aa9.25□□□□□ -0.93
GPHN-215ENST00000557654 ASAP3Q8TDY4 903 aa9.25□□□□□ -0.93
GPHN-215ENST00000557654 DMRTB1Q96MA1 342 aa9.25□□□□□ -0.93
GPHN-215ENST00000557654 USP21Q9UK80 565 aa9.25□□□□□ -0.93
GPHN-215ENST00000557654 DLL1O00548 723 aa9.24□□□□□ -0.93
GPHN-215ENST00000557654 MBTPS1Q14703 1052 aa9.24□□□□□ -0.93
GPHN-215ENST00000557654 HGSNATQ68CP4 663 aa9.24□□□□□ -0.93
GPHN-215ENST00000557654 CACTIN-AS1Q8N1I8 211 aa9.24□□□□□ -0.93
GPHN-215ENST00000557654 LENG1Q96BZ8 264 aaPredicted RBP9.24□□□□□ -0.93
GPHN-215ENST00000557654 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
GPHN-215ENST00000557654 C9orf172C9J069 976 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 NEFLP07196 543 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 GATA4P43694 442 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 ADGRE1Q14246 886 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 CSRNP1Q96S65 589 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 MUC3BQ9H195 1237 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 KCNK4Q9NYG8 393 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
GPHN-215ENST00000557654 TM4SF5O14894 197 aa9.22□□□□□ -0.93
GPHN-215ENST00000557654 FSCN2O14926 492 aa9.22□□□□□ -0.93
GPHN-215ENST00000557654 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
GPHN-215ENST00000557654 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
GPHN-215ENST00000557654 CCDC74AQ96AQ1 378 aa9.22□□□□□ -0.93
GPHN-215ENST00000557654 ALKBH8Q96BT7 664 aaKnown RBP9.22□□□□□ -0.93
GPHN-215ENST00000557654 BHLHE41Q9C0J9 482 aaPredicted RBP9.22□□□□□ -0.93
GPHN-215ENST00000557654 H3BRJ5 948 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
GPHN-215ENST00000557654 DOC2BQ14184 412 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 DSC3Q14574 896 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 SPRED3Q2MJR0 410 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 IGF2-ASQ6U949 168 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 PI16Q6UXB8 463 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 VN1R5Q7Z5H4 357 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 KLHDC7BQ96G42 594 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 TCF12Q99081 682 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
GPHN-215ENST00000557654 FAM177BA6PVY3 158 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
GPHN-215ENST00000557654 TREHO43280 583 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 ALX3O95076 343 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 WISP1O95388 367 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 GRIA4P48058 902 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 EPS8L3Q8TE67 593 aaKnown RBP9.2□□□□□ -0.94
GPHN-215ENST00000557654 BSNDQ8WZ55 320 aa9.2□□□□□ -0.94
GPHN-215ENST00000557654 ADAM11O75078 769 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
GPHN-215ENST00000557654 CABP4P57796 275 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 PLCB3Q01970 1234 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 FAM117BQ6P1L5 589 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 AGGF1Q8N302 714 aaeCLIP9.19□□□□□ -0.94
GPHN-215ENST00000557654 SETDB2Q96T68 719 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 EHD4Q9H223 541 aa9.19□□□□□ -0.94
GPHN-215ENST00000557654 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
GPHN-215ENST00000557654 PNMA6FA0A0J9YX94 578 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 FURINP09958 794 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 NOS3P29474 1203 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 CD68P34810 354 aaPredicted RBP9.18□□□□□ -0.94
GPHN-215ENST00000557654 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms