RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RHPN1Q8TCX5 695 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 EXOC6BQ9Y2D4 811 aa17.39■□□□□ 0.37
SUPT16H-208ENST00000557652 ZNF609O15014 1411 aa17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 RASSF7Q02833 373 aa17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 TFCP2Q12800 502 aa17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 HELBQ8NG08 1087 aaPredicted RBP17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 IRS2Q9Y4H2 1338 aa17.38■□□□□ 0.37
SUPT16H-208ENST00000557652 G3V3G9 751 aa17.37■□□□□ 0.37
SUPT16H-208ENST00000557652 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
SUPT16H-208ENST00000557652 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
SUPT16H-208ENST00000557652 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
SUPT16H-208ENST00000557652 ZNRF3Q9ULT6 936 aa17.37■□□□□ 0.37
SUPT16H-208ENST00000557652 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 AOC3Q16853 763 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 C9orf131Q5VYM1 1079 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
SUPT16H-208ENST00000557652 SCN9AQ15858 1988 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 FZD9O00144 591 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 SEMA3EO15041 775 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 IL1R1P14778 569 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
SUPT16H-208ENST00000557652 MMP14P50281 582 aa17.34■□□□□ 0.37
SUPT16H-208ENST00000557652 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
SUPT16H-208ENST00000557652 ZNF512BQ96KM6 892 aaPredicted RBP17.34■□□□□ 0.37
SUPT16H-208ENST00000557652 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
SUPT16H-208ENST00000557652 PDS5AQ29RF7 1337 aaKnown RBP17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 ECE2O60344 883 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 IGSF3O75054 1194 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 TNIP1Q15025 636 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 DPY19L2Q6NUT2 758 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 SLC51AQ86UW1 340 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 CD209Q9NNX6 404 aa17.33■□□□□ 0.36
SUPT16H-208ENST00000557652 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 PRELPP51888 382 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 SCN4AP35499 1836 aa17.32■□□□□ 0.36
SUPT16H-208ENST00000557652 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 ZNF646O15015 1829 aaPredicted RBP17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 MYO3BQ8WXR4 1341 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 TIMM10P62072 90 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 STRIP1Q5VSL9 837 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 AACSQ86V21 672 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 TXNRD3Q86VQ6 643 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 COL4A5P29400 1685 aa17.31■□□□□ 0.36
SUPT16H-208ENST00000557652 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 RPS12P25398 132 aaKnown RBP17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 GPC2Q8N158 579 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 TBC1D22AQ8WUA7 517 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
SUPT16H-208ENST00000557652 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 SNAP23O00161 211 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 IGHDP01880 384 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 KLRK1P26718 216 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 ARID4AP29374 1257 aaPredicted RBP17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 GYG1P46976 350 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 CCDC102BQ68D86 513 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 SUGT1Q9Y2Z0 365 aa17.29■□□□□ 0.36
SUPT16H-208ENST00000557652 KDM2BQ8NHM5 1336 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 WDR90Q96KV7 1748 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 GLTPD2A6NH11 291 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 WTIPA6NIX2 430 aaPredicted RBP17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 BCAMP50895 628 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 DOK7Q18PE1 504 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 DBNLQ9UJU6 430 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-208ENST00000557652 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 APBB1O00213 710 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms