RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 CASP7P55210 303 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 POLA2Q14181 598 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 CST9Q5W186 159 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 SIRT2Q8IXJ6 389 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 MPNDQ8N594 471 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 CELF1Q92879 486 aaKnown RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
PRKCH-227ENST00000557599 CTSWP56202 376 aa12.99□□□□□ -0.33
PRKCH-227ENST00000557599 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRKCH-227ENST00000557599 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
PRKCH-227ENST00000557599 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
PRKCH-227ENST00000557599 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
PRKCH-227ENST00000557599 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
PRKCH-227ENST00000557599 APBB1O00213 710 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
PRKCH-227ENST00000557599 NUCB1Q02818 461 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 IFIT5Q13325 482 aaKnown RBP12.98□□□□□ -0.33
PRKCH-227ENST00000557599 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 CIAPIN1Q6FI81 312 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
PRKCH-227ENST00000557599 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 PODXL2Q9NZ53 605 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
PRKCH-227ENST00000557599 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 RGS3P49796 1198 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 FOXO4P98177 505 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 DPF2Q92785 391 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 HHIPL1Q96JK4 782 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
PRKCH-227ENST00000557599 TRAF5O00463 557 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 LNPKQ9C0E8 428 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
PRKCH-227ENST00000557599 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
PRKCH-227ENST00000557599 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
PRKCH-227ENST00000557599 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
PRKCH-227ENST00000557599 GPSM2P81274 684 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 TNIP1Q15025 636 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
PRKCH-227ENST00000557599 TBC1D16Q8TBP0 767 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
PRKCH-227ENST00000557599 BCL11AQ9H165 835 aa12.95□□□□□ -0.34
PRKCH-227ENST00000557599 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
PRKCH-227ENST00000557599 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 RAD17O75943 681 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 CSF1RP07333 972 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
PRKCH-227ENST00000557599 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 SIL1Q9H173 461 aa12.94□□□□□ -0.34
PRKCH-227ENST00000557599 PSMD14O00487 310 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 CIAO1O76071 339 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 EGFRP00533 1210 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 ITGA6P23229 1130 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 RPS12P25398 132 aaKnown RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 IL15P40933 162 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 CNNM1Q9NRU3 951 aa12.93□□□□□ -0.34
PRKCH-227ENST00000557599 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
PRKCH-227ENST00000557599 LAMB1P07942 1786 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 EYA2O00167 538 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
PRKCH-227ENST00000557599 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
PRKCH-227ENST00000557599 CYP4F22Q6NT55 531 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
PRKCH-227ENST00000557599 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
PRKCH-227ENST00000557599 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
PRKCH-227ENST00000557599 POLR2AP24928 1970 aaKnown RBP12.91□□□□□ -0.34
PRKCH-227ENST00000557599 ECE2O60344 883 aa12.91□□□□□ -0.34
PRKCH-227ENST00000557599 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
PRKCH-227ENST00000557599 MAP2K2P36507 400 aa12.91□□□□□ -0.34
PRKCH-227ENST00000557599 ECE1P42892 770 aa12.91□□□□□ -0.34
PRKCH-227ENST00000557599 RFX5P48382 616 aaPredicted RBP12.91□□□□□ -0.34
PRKCH-227ENST00000557599 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms