RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 GMLQ99445 158 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 DBF4Q9UBU7 674 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-225ENST00000557559 LAMB1P07942 1786 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 MED23Q9ULK4 1368 aa9.53□□□□□ -0.88
PRKCH-225ENST00000557559 MANSC4A6NHS7 340 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-225ENST00000557559 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
PRKCH-225ENST00000557559 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-225ENST00000557559 HYPKQ9NX55 129 aa9.53□□□□□ -0.88
PRKCH-225ENST00000557559 ATP5J2-PTCD1G3V325 749 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 ZBTB48P10074 688 aaPredicted RBP9.52□□□□□ -0.89
PRKCH-225ENST00000557559 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 MOB2Q70IA6 237 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
PRKCH-225ENST00000557559 MKI67P46013 3256 aaKnown RBP9.52□□□□□ -0.89
PRKCH-225ENST00000557559 UNCXA6NJT0 531 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 WNT10BO00744 389 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 PDE8AO60658 829 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 FXR1P51114 621 aaKnown RBP eCLIP9.51□□□□□ -0.89
PRKCH-225ENST00000557559 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
PRKCH-225ENST00000557559 NBPF9Q3BBW0 867 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-225ENST00000557559 STRIP1Q5VSL9 837 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 OTUD7BQ6GQQ9 843 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 OTOP1Q7RTM1 612 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 ANKRD18AQ8IVF6 992 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 CDC5LQ99459 802 aaKnown RBP9.51□□□□□ -0.89
PRKCH-225ENST00000557559 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
PRKCH-225ENST00000557559 ZNF646O15015 1829 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-225ENST00000557559 CHL1O00533 1208 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-225ENST00000557559 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
PRKCH-225ENST00000557559 PTPN12Q05209 780 aaKnown RBP9.5□□□□□ -0.89
PRKCH-225ENST00000557559 ARHGEF6Q15052 776 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 LDLRAD1Q5T700 205 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 ARMC5Q96C12 935 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 TMEM106CQ9BVX2 250 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 PPP2R3BQ9Y5P8 575 aa9.5□□□□□ -0.89
PRKCH-225ENST00000557559 CENPFP49454 3210 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-225ENST00000557559 DACT2Q5SW24 774 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 PRAMEF18Q5VWM3 479 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 CHMP4AQ9BY43 222 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 COA1Q9GZY4 146 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 ANGEL1Q9UNK9 670 aaKnown RBP9.49□□□□□ -0.89
PRKCH-225ENST00000557559 PTPN22Q9Y2R2 807 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 CEP290O15078 2479 aa9.49□□□□□ -0.89
PRKCH-225ENST00000557559 ECM29Q5VYK3 1845 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 SASH1O94885 1247 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 DDX58O95786 925 aaKnown RBP9.48□□□□□ -0.89
PRKCH-225ENST00000557559 PRKG1Q13976 671 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 MAP3K11Q16584 847 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 SLC10A4Q96EP9 437 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 R3HDMLQ9H3Y0 253 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 BSDC1Q9NW68 430 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-225ENST00000557559 CWC25Q9NXE8 425 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-225ENST00000557559 SCAF8Q9UPN6 1271 aaKnown RBP9.48□□□□□ -0.89
PRKCH-225ENST00000557559 MYH3P11055 1940 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 KIAA0100Q14667 2235 aaKnown RBP9.48□□□□□ -0.89
PRKCH-225ENST00000557559 BRCA2P51587 3418 aa9.48□□□□□ -0.89
PRKCH-225ENST00000557559 MYO1BO43795 1136 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
PRKCH-225ENST00000557559 CTSWP56202 376 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 KRT24Q2M2I5 525 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 NBPF11Q86T75 865 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 WNK4Q96J92 1243 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 LAS1LQ9Y4W2 734 aaKnown RBP9.47□□□□□ -0.89
PRKCH-225ENST00000557559 SPEF2Q9C093 1822 aa9.47□□□□□ -0.89
PRKCH-225ENST00000557559 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
PRKCH-225ENST00000557559 IREB2P48200 963 aaKnown RBP9.46□□□□□ -0.9
PRKCH-225ENST00000557559 SP3Q02447 781 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 CD99L2Q8TCZ2 262 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 ZNF333Q96JL9 665 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 MYD88Q99836 296 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 DEFB129Q9H1M3 183 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 LEMD3Q9Y2U8 911 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
PRKCH-225ENST00000557559 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 WDHD1O75717 1129 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-225ENST00000557559 EN2P19622 333 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-225ENST00000557559 CRHR2Q13324 411 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 DLGAP5Q15398 846 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 NEUROD2Q15784 382 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 TTLL5Q6EMB2 1281 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 KIAA0825Q8IV33 1275 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 ANKRD13AQ8IZ07 590 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms