RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
VRK1-207ENST00000557352 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
VRK1-207ENST00000557352 FAM13AO94988 1023 aa8.58□□□□□ -1.04
VRK1-207ENST00000557352 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
VRK1-207ENST00000557352 AAMPQ13685 434 aa8.58□□□□□ -1.04
VRK1-207ENST00000557352 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
VRK1-207ENST00000557352 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
VRK1-207ENST00000557352 SH2B1Q9NRF2 756 aaPredicted RBP8.58□□□□□ -1.04
VRK1-207ENST00000557352 TM4SF5O14894 197 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 ACPPP15309 386 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 CDC25BP30305 580 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 SF3B2Q13435 895 aaKnown RBP8.57□□□□□ -1.04
VRK1-207ENST00000557352 ADAM19Q9H013 955 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 ANO2Q9NQ90 1003 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
VRK1-207ENST00000557352 NFKBIEO00221 500 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 FZD6O60353 706 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 ABL1P00519 1130 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 PTPRAP18433 802 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 EPHA1P21709 976 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 PMEPA1Q969W9 287 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 DZANK1Q9NVP4 752 aa8.56□□□□□ -1.04
VRK1-207ENST00000557352 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
VRK1-207ENST00000557352 ZNF211Q13398 564 aaPredicted RBP8.55□□□□□ -1.04
VRK1-207ENST00000557352 LRP8Q14114 963 aa8.55□□□□□ -1.04
VRK1-207ENST00000557352 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
VRK1-207ENST00000557352 CARD10Q9BWT7 1032 aa8.55□□□□□ -1.04
VRK1-207ENST00000557352 FSCN2O14926 492 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 HYAL3O43820 417 aaPredicted RBP8.54□□□□□ -1.04
VRK1-207ENST00000557352 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 TRPA1O75762 1119 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 USP5P45974 858 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 Q6ZS46 218 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.54□□□□□ -1.04
VRK1-207ENST00000557352 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
VRK1-207ENST00000557352 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 PDE2AO00408 941 aaPredicted RBP8.53□□□□□ -1.04
VRK1-207ENST00000557352 EREGO14944 169 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 WISP1O95388 367 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 EHHADHQ08426 723 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 CCDC87Q9NVE4 849 aa8.53□□□□□ -1.04
VRK1-207ENST00000557352 PHACTR2O75167 634 aa8.52□□□□□ -1.05
VRK1-207ENST00000557352 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.05
VRK1-207ENST00000557352 ARID3AQ99856 593 aa8.52□□□□□ -1.05
VRK1-207ENST00000557352 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
VRK1-207ENST00000557352 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
VRK1-207ENST00000557352 H3BRJ5 948 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 GLB1P16278 677 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 B4GALNT3Q6L9W6 998 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 ACAD11Q709F0 780 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 GJD3Q8N144 294 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 TMEM102Q8N9M5 508 aaPredicted RBP8.51□□□□□ -1.05
VRK1-207ENST00000557352 KLHDC7BQ96G42 594 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 EGFL7Q9UHF1 273 aa8.51□□□□□ -1.05
VRK1-207ENST00000557352 DDX3YO15523 660 aaKnown RBP8.5□□□□□ -1.05
VRK1-207ENST00000557352 ICMTO60725 284 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 CABP4P57796 275 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
VRK1-207ENST00000557352 UBL7Q96S82 380 aaPredicted RBP8.5□□□□□ -1.05
VRK1-207ENST00000557352 OSMRQ99650 979 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 RNF112Q9ULX5 631 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 SOX13Q9UN79 622 aa8.5□□□□□ -1.05
VRK1-207ENST00000557352 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
VRK1-207ENST00000557352 ADAM11O75078 769 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 EDN3P14138 238 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 SERPINB4P48594 390 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 DUOXA2Q1HG44 320 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 KIAA1211Q6ZU35 1233 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 NBPF11Q86T75 865 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 WNT8BQ93098 351 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 NXPE3Q969Y0 559 aa8.49□□□□□ -1.05
VRK1-207ENST00000557352 FSTP19883 344 aa8.48□□□□□ -1.05
VRK1-207ENST00000557352 ECM1Q16610 540 aa8.48□□□□□ -1.05
VRK1-207ENST00000557352 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
VRK1-207ENST00000557352 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
VRK1-207ENST00000557352 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
VRK1-207ENST00000557352 H3BRB1 525 aa8.47□□□□□ -1.05
VRK1-207ENST00000557352 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
VRK1-207ENST00000557352 SLC7A3Q8WY07 619 aa8.47□□□□□ -1.05
VRK1-207ENST00000557352 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
VRK1-207ENST00000557352 TUT1Q9H6E5 874 aaKnown RBP8.47□□□□□ -1.05
VRK1-207ENST00000557352 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
VRK1-207ENST00000557352 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
VRK1-207ENST00000557352 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
VRK1-207ENST00000557352 HGSNATQ68CP4 663 aa8.46□□□□□ -1.06
VRK1-207ENST00000557352 BSNDQ8WZ55 320 aa8.46□□□□□ -1.06
VRK1-207ENST00000557352 CEP41Q9BYV8 373 aa8.46□□□□□ -1.06
VRK1-207ENST00000557352 LATS2Q9NRM7 1088 aa8.46□□□□□ -1.06
VRK1-207ENST00000557352 POLR3DP05423 398 aaPredicted RBP8.45□□□□□ -1.06
VRK1-207ENST00000557352 VN1R5Q7Z5H4 357 aa8.45□□□□□ -1.06
VRK1-207ENST00000557352 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
VRK1-207ENST00000557352 GLYCTKQ8IVS8 523 aa8.45□□□□□ -1.06
VRK1-207ENST00000557352 ARMC10Q8N2F6 343 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms