RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 EPS15P42566 896 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 PTPN12Q05209 780 aaKnown RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 LRRC24Q50LG9 513 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 METTL24Q5JXM2 366 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 TXNRD3Q86VQ6 643 aa15.57■□□□□ 0.08
SLIRP-209ENST00000557342 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 ADARB2Q9NS39 739 aaKnown RBP15.57■□□□□ 0.08
SLIRP-209ENST00000557342 H7C1D1 291 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 CIAO1O76071 339 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 RLBP1P12271 317 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 MTX1Q13505 466 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 ZNF804AQ7Z570 1209 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 CNOT7Q9UIV1 285 aaKnown RBP15.56■□□□□ 0.08
SLIRP-209ENST00000557342 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 ZNF609O15014 1411 aa15.56■□□□□ 0.08
SLIRP-209ENST00000557342 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 PDE8BO95263 885 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 HSPA6P17066 643 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 KLRK1P26718 216 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 RSBN1LQ6PCB5 846 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-209ENST00000557342 AGBL3Q8NEM8 1001 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-209ENST00000557342 MYH13Q9UKX3 1938 aa15.55■□□□□ 0.08
SLIRP-209ENST00000557342 MYO3BQ8WXR4 1341 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 SNAP23O00161 211 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-209ENST00000557342 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 MICALL2Q8IY33 904 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
SLIRP-209ENST00000557342 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
SLIRP-209ENST00000557342 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
SLIRP-209ENST00000557342 IL15P40933 162 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-209ENST00000557342 PUM3Q15397 648 aaKnown RBP15.53■□□□□ 0.08
SLIRP-209ENST00000557342 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
SLIRP-209ENST00000557342 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
SLIRP-209ENST00000557342 SIL1Q9H173 461 aa15.53■□□□□ 0.08
SLIRP-209ENST00000557342 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
SLIRP-209ENST00000557342 IFIT1P09914 478 aaKnown RBP15.52■□□□□ 0.08
SLIRP-209ENST00000557342 IL1R1P14778 569 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
SLIRP-209ENST00000557342 MMP14P50281 582 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 APLP1P51693 650 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
SLIRP-209ENST00000557342 TRPM7Q96QT4 1865 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 GTF2IP78347 998 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 PDE3AQ14432 1141 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 MVPQ14764 893 aaKnown RBP15.51■□□□□ 0.07
SLIRP-209ENST00000557342 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 VPS37DQ86XT2 251 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 ZC3H15Q8WU90 426 aaKnown RBP15.51■□□□□ 0.07
SLIRP-209ENST00000557342 LPIN2Q92539 896 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
SLIRP-209ENST00000557342 ARAP2Q8WZ64 1704 aa15.51■□□□□ 0.07
SLIRP-209ENST00000557342 POLR2AP24928 1970 aaKnown RBP15.51■□□□□ 0.07
SLIRP-209ENST00000557342 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 SLC5A1P13866 664 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 FGFR2P21802 821 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 GYG1P46976 350 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 FAM84BQ96KN1 310 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-209ENST00000557342 GMLQ99445 158 aa15.5■□□□□ 0.07
SLIRP-209ENST00000557342 PNMA6EA0A0J9YXQ4 647 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 SHTN1A0MZ66 631 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 SASH1O94885 1247 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
SLIRP-209ENST00000557342 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
SLIRP-209ENST00000557342 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 FBXO33Q7Z6M2 555 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
SLIRP-209ENST00000557342 TRPM4Q8TD43 1214 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
SLIRP-209ENST00000557342 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
SLIRP-209ENST00000557342 POLA2Q14181 598 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 ATP2B3Q16720 1220 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 KIF4BQ2VIQ3 1234 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 TBC1D10BQ4KMP7 808 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-209ENST00000557342 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-209ENST00000557342 SSH3Q8TE77 659 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 C1orf115Q9H7X2 142 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 PGAP2Q9UHJ9 254 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
SLIRP-209ENST00000557342 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
SLIRP-209ENST00000557342 FAM205AQ6ZU69 1335 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 398.9 ms