RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 MXD3Q9BW11 206 aa23.85■■□□□ 1.41
PRKCH-223ENST00000557294 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
PRKCH-223ENST00000557294 WTIPA6NIX2 430 aaPredicted RBP23.84■■□□□ 1.41
PRKCH-223ENST00000557294 PRKG1Q13976 671 aa23.84■■□□□ 1.41
PRKCH-223ENST00000557294 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
PRKCH-223ENST00000557294 STRIP1Q5VSL9 837 aa23.84■■□□□ 1.41
PRKCH-223ENST00000557294 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
PRKCH-223ENST00000557294 CCDC85AQ96PX6 553 aaPredicted RBP23.84■■□□□ 1.41
PRKCH-223ENST00000557294 MANSC4A6NHS7 340 aaPredicted RBP23.83■■□□□ 1.41
PRKCH-223ENST00000557294 IFNL1Q8IU54 200 aa23.83■■□□□ 1.41
PRKCH-223ENST00000557294 HTTP42858 3142 aa23.83■■□□□ 1.4
PRKCH-223ENST00000557294 MED23Q9ULK4 1368 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 GOLGA2Q08379 1002 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 APOBEC3FQ8IUX4 373 aaKnown RBP23.82■■□□□ 1.4
PRKCH-223ENST00000557294 SLC10A4Q96EP9 437 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 MYD88Q99836 296 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 ANGEL1Q9UNK9 670 aaKnown RBP23.82■■□□□ 1.4
PRKCH-223ENST00000557294 TRIM35Q9UPQ4 493 aa23.82■■□□□ 1.4
PRKCH-223ENST00000557294 SASH1O94885 1247 aa23.81■■□□□ 1.4
PRKCH-223ENST00000557294 FXR1P51114 621 aaKnown RBP eCLIP23.81■■□□□ 1.4
PRKCH-223ENST00000557294 COA1Q9GZY4 146 aa23.81■■□□□ 1.4
PRKCH-223ENST00000557294 MINPP1Q9UNW1 487 aa23.81■■□□□ 1.4
PRKCH-223ENST00000557294 PTPN22Q9Y2R2 807 aa23.81■■□□□ 1.4
PRKCH-223ENST00000557294 CENPFP49454 3210 aa23.8■■□□□ 1.4
PRKCH-223ENST00000557294 JARID2Q92833 1246 aaPredicted RBP23.8■■□□□ 1.4
PRKCH-223ENST00000557294 PHAXQ9H814 394 aaKnown RBP23.8■■□□□ 1.4
PRKCH-223ENST00000557294 BSDC1Q9NW68 430 aaPredicted RBP23.8■■□□□ 1.4
PRKCH-223ENST00000557294 ZBTB48P10074 688 aaPredicted RBP23.79■■□□□ 1.4
PRKCH-223ENST00000557294 MAP3K11Q16584 847 aa23.79■■□□□ 1.4
PRKCH-223ENST00000557294 FBXW7Q969H0 707 aa23.79■■□□□ 1.4
PRKCH-223ENST00000557294 ZBED3Q96IU2 234 aaPredicted RBP23.79■■□□□ 1.4
PRKCH-223ENST00000557294 CDC5LQ99459 802 aaKnown RBP23.79■■□□□ 1.4
PRKCH-223ENST00000557294 CWC25Q9NXE8 425 aaPredicted RBP23.79■■□□□ 1.4
PRKCH-223ENST00000557294 CCT4P50991 539 aaKnown RBP23.78■■□□□ 1.4
PRKCH-223ENST00000557294 TTLL5Q6EMB2 1281 aa23.78■■□□□ 1.4
PRKCH-223ENST00000557294 ARMC5Q96C12 935 aa23.78■■□□□ 1.4
PRKCH-223ENST00000557294 ERO1AQ96HE7 468 aa23.78■■□□□ 1.4
PRKCH-223ENST00000557294 UNCXA6NJT0 531 aa23.77■■□□□ 1.4
PRKCH-223ENST00000557294 EN2P19622 333 aaPredicted RBP23.77■■□□□ 1.4
PRKCH-223ENST00000557294 IGF2BP3O00425 579 aaKnown RBP eCLIP23.76■■□□□ 1.39
PRKCH-223ENST00000557294 DEFB129Q9H1M3 183 aa23.76■■□□□ 1.39
PRKCH-223ENST00000557294 FZD1Q9UP38 647 aa23.76■■□□□ 1.39
PRKCH-223ENST00000557294 BRCA2P51587 3418 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 TXNRD3Q86VQ6 643 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 KIAA0825Q8IV33 1275 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 CCDC146Q8IYE0 955 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 TTLL11Q8NHH1 800 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 WNK4Q96J92 1243 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 METTL22Q9BUU2 404 aaPredicted RBP23.75■■□□□ 1.39
PRKCH-223ENST00000557294 LEMD3Q9Y2U8 911 aa23.75■■□□□ 1.39
PRKCH-223ENST00000557294 PPP1R12BO60237 982 aaPredicted RBP23.74■■□□□ 1.39
PRKCH-223ENST00000557294 OTUD7BQ6GQQ9 843 aa23.74■■□□□ 1.39
PRKCH-223ENST00000557294 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
PRKCH-223ENST00000557294 CTSWP56202 376 aa23.73■■□□□ 1.39
PRKCH-223ENST00000557294 CD99L2Q8TCZ2 262 aa23.73■■□□□ 1.39
PRKCH-223ENST00000557294 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
PRKCH-223ENST00000557294 CLMNQ96JQ2 1002 aa23.73■■□□□ 1.39
PRKCH-223ENST00000557294 CRHR2Q13324 411 aa23.72■■□□□ 1.39
PRKCH-223ENST00000557294 TMEM106CQ9BVX2 250 aa23.72■■□□□ 1.39
PRKCH-223ENST00000557294 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
PRKCH-223ENST00000557294 COLQQ9Y215 455 aaPredicted RBP23.72■■□□□ 1.39
PRKCH-223ENST00000557294 COL1A1P02452 1464 aaPredicted RBP23.72■■□□□ 1.39
PRKCH-223ENST00000557294 SP3Q02447 781 aa23.71■■□□□ 1.39
PRKCH-223ENST00000557294 GREM2Q9H772 168 aa23.71■■□□□ 1.39
PRKCH-223ENST00000557294 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.71■■□□□ 1.39
PRKCH-223ENST00000557294 PPP2R3BQ9Y5P8 575 aa23.71■■□□□ 1.39
PRKCH-223ENST00000557294 DDX58O95786 925 aaKnown RBP23.7■■□□□ 1.38
PRKCH-223ENST00000557294 GTF2IP78347 998 aa23.7■■□□□ 1.38
PRKCH-223ENST00000557294 RALBP1Q15311 655 aa23.7■■□□□ 1.38
PRKCH-223ENST00000557294 DLGAP5Q15398 846 aa23.7■■□□□ 1.38
PRKCH-223ENST00000557294 SUPT20HL1Q3ZLR7 823 aa23.7■■□□□ 1.38
PRKCH-223ENST00000557294 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.38
PRKCH-223ENST00000557294 ZNF804BA4D1E1 1349 aa23.69■■□□□ 1.38
PRKCH-223ENST00000557294 TESPA1A2RU30 521 aaPredicted RBP23.69■■□□□ 1.38
PRKCH-223ENST00000557294 RBBP6Q7Z6E9 1792 aaKnown RBP23.69■■□□□ 1.38
PRKCH-223ENST00000557294 KIAA0100Q14667 2235 aaKnown RBP23.69■■□□□ 1.38
PRKCH-223ENST00000557294 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
PRKCH-223ENST00000557294 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
PRKCH-223ENST00000557294 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
PRKCH-223ENST00000557294 ZNF333Q96JL9 665 aa23.68■■□□□ 1.38
PRKCH-223ENST00000557294 PTPN18Q99952 460 aa23.68■■□□□ 1.38
PRKCH-223ENST00000557294 ANKRD2Q9GZV1 360 aa23.68■■□□□ 1.38
PRKCH-223ENST00000557294 NBPF11Q86T75 865 aa23.67■■□□□ 1.38
PRKCH-223ENST00000557294 MAP3K2Q9Y2U5 619 aa23.67■■□□□ 1.38
PRKCH-223ENST00000557294 USP2O75604 605 aaPredicted RBP23.66■■□□□ 1.38
PRKCH-223ENST00000557294 IGKV5-2P06315 115 aa23.66■■□□□ 1.38
PRKCH-223ENST00000557294 KLRK1P26718 216 aa23.66■■□□□ 1.38
PRKCH-223ENST00000557294 IGHMBP2P38935 993 aaKnown RBP23.66■■□□□ 1.38
PRKCH-223ENST00000557294 IREB2P48200 963 aaKnown RBP23.66■■□□□ 1.38
PRKCH-223ENST00000557294 CAP1Q01518 475 aa23.66■■□□□ 1.38
PRKCH-223ENST00000557294 GJA5P36382 358 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 ARHGEF6Q15052 776 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 CHMP4AQ9BY43 222 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 CD209Q9NNX6 404 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 SSC5DA1L4H1 1573 aa23.65■■□□□ 1.38
PRKCH-223ENST00000557294 MYO1BO43795 1136 aa23.64■■□□□ 1.37
PRKCH-223ENST00000557294 NBPF12Q5TAG4 269 aaPredicted RBP23.64■■□□□ 1.37
PRKCH-223ENST00000557294 KSR2Q6VAB6 950 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms