RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
PSEN1-221ENST00000557293 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
PSEN1-221ENST00000557293 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
PSEN1-221ENST00000557293 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
PSEN1-221ENST00000557293 MYD88Q99836 296 aa16.33■□□□□ 0.2
PSEN1-221ENST00000557293 MINPP1Q9UNW1 487 aa16.33■□□□□ 0.2
PSEN1-221ENST00000557293 SASH1O94885 1247 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 CAP1Q01518 475 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
PSEN1-221ENST00000557293 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
PSEN1-221ENST00000557293 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
PSEN1-221ENST00000557293 NF2P35240 595 aa16.31■□□□□ 0.2
PSEN1-221ENST00000557293 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
PSEN1-221ENST00000557293 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
PSEN1-221ENST00000557293 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
PSEN1-221ENST00000557293 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
PSEN1-221ENST00000557293 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
PSEN1-221ENST00000557293 INHBEP58166 350 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-221ENST00000557293 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
PSEN1-221ENST00000557293 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
PSEN1-221ENST00000557293 MANSC4A6NHS7 340 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-221ENST00000557293 EN2P19622 333 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-221ENST00000557293 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
PSEN1-221ENST00000557293 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
PSEN1-221ENST00000557293 METTL22Q9BUU2 404 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-221ENST00000557293 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
PSEN1-221ENST00000557293 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
PSEN1-221ENST00000557293 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-221ENST00000557293 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
PSEN1-221ENST00000557293 MMP14P50281 582 aa16.28■□□□□ 0.2
PSEN1-221ENST00000557293 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
PSEN1-221ENST00000557293 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
PSEN1-221ENST00000557293 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.2
PSEN1-221ENST00000557293 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 KLRK1P26718 216 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 GJA5P36382 358 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 CTSWP56202 376 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
PSEN1-221ENST00000557293 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 WNK4Q96J92 1243 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 GREM2Q9H772 168 aa16.27■□□□□ 0.2
PSEN1-221ENST00000557293 HTTP42858 3142 aa16.27■□□□□ 0.19
PSEN1-221ENST00000557293 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-221ENST00000557293 CD99L2Q8TCZ2 262 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 FBXW7Q969H0 707 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
PSEN1-221ENST00000557293 PTPN18Q99952 460 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
PSEN1-221ENST00000557293 ZBTB48P10074 688 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-221ENST00000557293 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
PSEN1-221ENST00000557293 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
PSEN1-221ENST00000557293 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
PSEN1-221ENST00000557293 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
PSEN1-221ENST00000557293 TESPA1A2RU30 521 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-221ENST00000557293 USP2O75604 605 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-221ENST00000557293 GTF2IP78347 998 aa16.24■□□□□ 0.19
PSEN1-221ENST00000557293 CRHR2Q13324 411 aa16.24■□□□□ 0.19
PSEN1-221ENST00000557293 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
PSEN1-221ENST00000557293 MTMR14Q8NCE2 650 aa16.24■□□□□ 0.19
PSEN1-221ENST00000557293 ERO1AQ96HE7 468 aa16.24■□□□□ 0.19
PSEN1-221ENST00000557293 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-221ENST00000557293 COLQQ9Y215 455 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-221ENST00000557293 AOX1Q06278 1338 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 RALBP1Q15311 655 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 EFCC1Q9HA90 598 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 MAP3K2Q9Y2U5 619 aa16.23■□□□□ 0.19
PSEN1-221ENST00000557293 ZNF804BA4D1E1 1349 aa16.22■□□□□ 0.19
PSEN1-221ENST00000557293 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
PSEN1-221ENST00000557293 H7C1W4 665 aa16.22■□□□□ 0.19
PSEN1-221ENST00000557293 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
PSEN1-221ENST00000557293 LAMB1P07942 1786 aa16.22■□□□□ 0.19
PSEN1-221ENST00000557293 SNAP23O00161 211 aa16.21■□□□□ 0.19
PSEN1-221ENST00000557293 SP3Q02447 781 aa16.21■□□□□ 0.19
PSEN1-221ENST00000557293 DLGAP5Q15398 846 aa16.21■□□□□ 0.19
PSEN1-221ENST00000557293 ZNF333Q96JL9 665 aa16.21■□□□□ 0.19
PSEN1-221ENST00000557293 PRMT6Q96LA8 375 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-221ENST00000557293 CD209Q9NNX6 404 aa16.21■□□□□ 0.19
PSEN1-221ENST00000557293 COL1A1P02452 1464 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-221ENST00000557293 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
PSEN1-221ENST00000557293 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-221ENST00000557293 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
PSEN1-221ENST00000557293 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
PSEN1-221ENST00000557293 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
PSEN1-221ENST00000557293 OTUD5Q96G74 571 aa16.2■□□□□ 0.18
PSEN1-221ENST00000557293 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms