RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 LAMB2P55268 1798 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 SGPL1O95470 568 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 NTSR2O95665 410 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 PRMT2P55345 433 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 ADAMTS19Q8TE59 1207 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 PAWRQ96IZ0 340 aaKnown RBP16.59■□□□□ 0.25
ABCD4-226ENST00000556971 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 RIPOR2Q9Y4F9 1068 aa16.59■□□□□ 0.25
ABCD4-226ENST00000556971 TEFQ10587 303 aa16.58■□□□□ 0.24
ABCD4-226ENST00000556971 RSBN1LQ6PCB5 846 aaPredicted RBP16.58■□□□□ 0.24
ABCD4-226ENST00000556971 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
ABCD4-226ENST00000556971 DIS3LQ8TF46 1054 aaKnown RBP16.58■□□□□ 0.24
ABCD4-226ENST00000556971 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-226ENST00000556971 C6orf229H3BNL8 230 aa16.57■□□□□ 0.24
ABCD4-226ENST00000556971 USP17L8P0C7I0 530 aa16.57■□□□□ 0.24
ABCD4-226ENST00000556971 UBXN2AP68543 259 aa16.57■□□□□ 0.24
ABCD4-226ENST00000556971 MTHFSDQ2M296 383 aaKnown RBP16.57■□□□□ 0.24
ABCD4-226ENST00000556971 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
ABCD4-226ENST00000556971 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-226ENST00000556971 GNRH1P01148 92 aa16.56■□□□□ 0.24
ABCD4-226ENST00000556971 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
ABCD4-226ENST00000556971 MRE11P49959 708 aa16.56■□□□□ 0.24
ABCD4-226ENST00000556971 SEMA6BQ9H3T3 888 aa16.56■□□□□ 0.24
ABCD4-226ENST00000556971 PSME4Q14997 1843 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 GRAPQ13588 217 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-226ENST00000556971 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 POLLQ9UGP5 575 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 SRRDQ9UH36 339 aa16.55■□□□□ 0.24
ABCD4-226ENST00000556971 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
ABCD4-226ENST00000556971 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
ABCD4-226ENST00000556971 TRIM47Q96LD4 638 aa16.54■□□□□ 0.24
ABCD4-226ENST00000556971 CTGFP29279 349 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 GMLQ99445 158 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 CACNA1GO43497 2377 aa16.53■□□□□ 0.24
ABCD4-226ENST00000556971 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
ABCD4-226ENST00000556971 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-226ENST00000556971 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.24
ABCD4-226ENST00000556971 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
ABCD4-226ENST00000556971 DEFB118Q96PH6 123 aa16.52■□□□□ 0.24
ABCD4-226ENST00000556971 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
ABCD4-226ENST00000556971 WNT10BO00744 389 aa16.51■□□□□ 0.23
ABCD4-226ENST00000556971 SASH1O94885 1247 aa16.51■□□□□ 0.23
ABCD4-226ENST00000556971 OSBPP22059 807 aa16.51■□□□□ 0.23
ABCD4-226ENST00000556971 EYA3Q99504 573 aa16.51■□□□□ 0.23
ABCD4-226ENST00000556971 TTYH1Q9H313 450 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-226ENST00000556971 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
ABCD4-226ENST00000556971 OTOFQ9HC10 1997 aa16.5■□□□□ 0.23
ABCD4-226ENST00000556971 HMOX1P09601 288 aa16.5■□□□□ 0.23
ABCD4-226ENST00000556971 GPSM2P81274 684 aa16.5■□□□□ 0.23
ABCD4-226ENST00000556971 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
ABCD4-226ENST00000556971 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 G3V3G9 751 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 TLR2O60603 784 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 IL13P35225 146 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 PSMC4P43686 418 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 CCL15Q16663 113 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 DCAF8Q5TAQ9 597 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
ABCD4-226ENST00000556971 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
ABCD4-226ENST00000556971 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
ABCD4-226ENST00000556971 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
ABCD4-226ENST00000556971 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
ABCD4-226ENST00000556971 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
ABCD4-226ENST00000556971 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
ABCD4-226ENST00000556971 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
ABCD4-226ENST00000556971 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
ABCD4-226ENST00000556971 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
ABCD4-226ENST00000556971 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
ABCD4-226ENST00000556971 NECAB3Q96P71 396 aaPredicted RBP16.47■□□□□ 0.23
ABCD4-226ENST00000556971 ASB2Q96Q27 587 aa16.47■□□□□ 0.23
ABCD4-226ENST00000556971 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.23
ABCD4-226ENST00000556971 HOXD10P28358 340 aa16.46■□□□□ 0.23
ABCD4-226ENST00000556971 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
ABCD4-226ENST00000556971 KIF6Q6ZMV9 814 aa16.46■□□□□ 0.23
ABCD4-226ENST00000556971 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
ABCD4-226ENST00000556971 CRISPLD2Q9H0B8 497 aa16.46■□□□□ 0.23
ABCD4-226ENST00000556971 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
ABCD4-226ENST00000556971 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
ABCD4-226ENST00000556971 FMNL1O95466 1100 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-226ENST00000556971 PRKCZQ05513 592 aa16.45■□□□□ 0.22
ABCD4-226ENST00000556971 SLAIN1Q8ND83 568 aa16.45■□□□□ 0.22
ABCD4-226ENST00000556971 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
ABCD4-226ENST00000556971 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
ABCD4-226ENST00000556971 COL1A1P02452 1464 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-226ENST00000556971 COL4A1P02462 1669 aa16.45■□□□□ 0.22
ABCD4-226ENST00000556971 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
ABCD4-226ENST00000556971 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
ABCD4-226ENST00000556971 INHAP05111 366 aa16.44■□□□□ 0.22
ABCD4-226ENST00000556971 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
ABCD4-226ENST00000556971 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms