RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 GPSM2P81274 684 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 NUCB1Q02818 461 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 DPP8Q6V1X1 898 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-213ENST00000556929 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 LPIN2Q92539 896 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
TMEM260-213ENST00000556929 AACSQ86V21 672 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 EYA3Q99504 573 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
TMEM260-213ENST00000556929 ZNF609O15014 1411 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 UFL1O94874 794 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 FGFR2P21802 821 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-213ENST00000556929 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-213ENST00000556929 CHD4Q14839 1912 aa11.94□□□□□ -0.5
TMEM260-213ENST00000556929 TIMM10P62072 90 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 CCDC158Q5M9N0 1113 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
TMEM260-213ENST00000556929 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 PSMD1Q99460 953 aa11.93□□□□□ -0.5
TMEM260-213ENST00000556929 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-213ENST00000556929 ZC3H12CQ9C0D7 883 aaKnown RBP11.93□□□□□ -0.5
TMEM260-213ENST00000556929 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
TMEM260-213ENST00000556929 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM260-213ENST00000556929 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 C15orf52Q6ZUT6 534 aaKnown RBP11.92□□□□□ -0.5
TMEM260-213ENST00000556929 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-213ENST00000556929 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
TMEM260-213ENST00000556929 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
TMEM260-213ENST00000556929 G3V3G9 751 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 SNAP23O00161 211 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 SLC51AQ86UW1 340 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 VPS37DQ86XT2 251 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-213ENST00000556929 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
TMEM260-213ENST00000556929 SBF1O95248 1867 aa11.91□□□□□ -0.5
TMEM260-213ENST00000556929 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 LTBP3Q9NS15 1303 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 ERC2O15083 957 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 MX1P20591 662 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
TMEM260-213ENST00000556929 GPR162Q16538 588 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
TMEM260-213ENST00000556929 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
TMEM260-213ENST00000556929 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-213ENST00000556929 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 ADORA1P30542 326 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 GYG1P46976 350 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-213ENST00000556929 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-213ENST00000556929 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
TMEM260-213ENST00000556929 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
TMEM260-213ENST00000556929 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 PSME4Q14997 1843 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 NFKBIEO00221 500 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-213ENST00000556929 YBX3P16989 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM260-213ENST00000556929 PDE4AP27815 886 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
TMEM260-213ENST00000556929 BCAMP50895 628 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 PDE1AP54750 535 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms