RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 COA1Q9GZY4 146 aa21.28■■□□□ 1
PSEN1-217ENST00000556533 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
PSEN1-217ENST00000556533 UBE4AQ14139 1066 aa21.27■■□□□ 1
PSEN1-217ENST00000556533 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
PSEN1-217ENST00000556533 RBM46Q8TBY0 533 aaKnown RBP21.27■■□□□ 1
PSEN1-217ENST00000556533 USP17L3A6NCW0 530 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 USP17L4A6NCW7 530 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 PDE8BO95263 885 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 POTEIP0CG38 1075 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 POTEJP0CG39 1038 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 MVPQ14764 893 aaKnown RBP21.26■□□□□ 0.99
PSEN1-217ENST00000556533 USP17L1Q7RTZ2 530 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 ATG9AQ7Z3C6 839 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 WDR90Q96KV7 1748 aa21.26■□□□□ 0.99
PSEN1-217ENST00000556533 PNMA6EA0A0J9YXQ4 647 aa21.25■□□□□ 0.99
PSEN1-217ENST00000556533 MTX1Q13505 466 aa21.25■□□□□ 0.99
PSEN1-217ENST00000556533 ZNF804AQ7Z570 1209 aa21.25■□□□□ 0.99
PSEN1-217ENST00000556533 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
PSEN1-217ENST00000556533 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
PSEN1-217ENST00000556533 CNOT7Q9UIV1 285 aaKnown RBP21.25■□□□□ 0.99
PSEN1-217ENST00000556533 SHTN1A0MZ66 631 aa21.24■□□□□ 0.99
PSEN1-217ENST00000556533 CIAO1O76071 339 aa21.24■□□□□ 0.99
PSEN1-217ENST00000556533 VIL1P09327 827 aaKnown RBP21.24■□□□□ 0.99
PSEN1-217ENST00000556533 GYG1P46976 350 aa21.24■□□□□ 0.99
PSEN1-217ENST00000556533 C15orf52Q6ZUT6 534 aaKnown RBP21.24■□□□□ 0.99
PSEN1-217ENST00000556533 PNMA8AQ86V59 439 aaPredicted RBP21.24■□□□□ 0.99
PSEN1-217ENST00000556533 SMC1BQ8NDV3 1235 aa21.24■□□□□ 0.99
PSEN1-217ENST00000556533 CD209Q9NNX6 404 aa21.24■□□□□ 0.99
PSEN1-217ENST00000556533 H7C1D1 291 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 IL15P40933 162 aaPredicted RBP21.23■□□□□ 0.99
PSEN1-217ENST00000556533 ATP8B2P98198 1209 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 PDE3AQ14432 1141 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 MICALL2Q8IY33 904 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 VGLL2Q8N8G2 317 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 MXD3Q9BW11 206 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 FBXO3Q9UK99 471 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 IRS2Q9Y4H2 1338 aa21.23■□□□□ 0.99
PSEN1-217ENST00000556533 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
PSEN1-217ENST00000556533 GTF2IP78347 998 aa21.22■□□□□ 0.99
PSEN1-217ENST00000556533 PUM3Q15397 648 aaKnown RBP21.22■□□□□ 0.99
PSEN1-217ENST00000556533 TTLL5Q6EMB2 1281 aa21.22■□□□□ 0.99
PSEN1-217ENST00000556533 RSBN1LQ6PCB5 846 aaPredicted RBP21.22■□□□□ 0.99
PSEN1-217ENST00000556533 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
PSEN1-217ENST00000556533 ADARB2Q9NS39 739 aaKnown RBP21.22■□□□□ 0.99
PSEN1-217ENST00000556533 IFIT1P09914 478 aaKnown RBP21.21■□□□□ 0.99
PSEN1-217ENST00000556533 RPS12P25398 132 aaKnown RBP21.21■□□□□ 0.99
PSEN1-217ENST00000556533 FSTL1Q12841 308 aa21.21■□□□□ 0.99
PSEN1-217ENST00000556533 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.99
PSEN1-217ENST00000556533 RBM26Q5T8P6 1007 aaKnown RBP21.21■□□□□ 0.99
PSEN1-217ENST00000556533 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
PSEN1-217ENST00000556533 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
PSEN1-217ENST00000556533 DPF2Q92785 391 aa21.21■□□□□ 0.99
PSEN1-217ENST00000556533 FAM84BQ96KN1 310 aaPredicted RBP21.21■□□□□ 0.99
PSEN1-217ENST00000556533 JAG2Q9Y219 1238 aa21.21■□□□□ 0.99
PSEN1-217ENST00000556533 SLC5A1P13866 664 aa21.2■□□□□ 0.98
PSEN1-217ENST00000556533 CAVIN4Q5BKX8 364 aa21.2■□□□□ 0.98
PSEN1-217ENST00000556533 DACT2Q5SW24 774 aa21.2■□□□□ 0.98
PSEN1-217ENST00000556533 STRIP1Q5VSL9 837 aa21.2■□□□□ 0.98
PSEN1-217ENST00000556533 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
PSEN1-217ENST00000556533 TFCP2Q12800 502 aa21.19■□□□□ 0.98
PSEN1-217ENST00000556533 OS9Q13438 667 aaPredicted RBP21.19■□□□□ 0.98
PSEN1-217ENST00000556533 ATP2B3Q16720 1220 aa21.19■□□□□ 0.98
PSEN1-217ENST00000556533 SAMD7Q7Z3H4 446 aa21.19■□□□□ 0.98
PSEN1-217ENST00000556533 AGBL3Q8NEM8 1001 aa21.19■□□□□ 0.98
PSEN1-217ENST00000556533 CHMP4BQ9H444 224 aaKnown RBP21.19■□□□□ 0.98
PSEN1-217ENST00000556533 IQSEC3Q9UPP2 1182 aaPredicted RBP21.19■□□□□ 0.98
PSEN1-217ENST00000556533 FRAT2O75474 233 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-217ENST00000556533 SURF6O75683 361 aaKnown RBP21.18■□□□□ 0.98
PSEN1-217ENST00000556533 IL1R1P14778 569 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 FGFR2P21802 821 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 BCAMP50895 628 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
PSEN1-217ENST00000556533 POLA2Q14181 598 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 TBC1D10BQ4KMP7 808 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-217ENST00000556533 MAP1SQ66K74 1059 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-217ENST00000556533 CEP85Q6P2H3 762 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 LPIN2Q92539 896 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 ZBTB40Q9NUA8 1239 aa21.18■□□□□ 0.98
PSEN1-217ENST00000556533 USP17L8P0C7I0 530 aa21.17■□□□□ 0.98
PSEN1-217ENST00000556533 FBXO33Q7Z6M2 555 aa21.17■□□□□ 0.98
PSEN1-217ENST00000556533 TRPM4Q8TD43 1214 aa21.17■□□□□ 0.98
PSEN1-217ENST00000556533 TIMM10P62072 90 aa21.16■□□□□ 0.98
PSEN1-217ENST00000556533 TDRD7Q8NHU6 1098 aaKnown RBP21.16■□□□□ 0.98
PSEN1-217ENST00000556533 GMLQ99445 158 aa21.16■□□□□ 0.98
PSEN1-217ENST00000556533 SASH1O94885 1247 aa21.15■□□□□ 0.98
PSEN1-217ENST00000556533 EGFRP00533 1210 aa21.15■□□□□ 0.98
PSEN1-217ENST00000556533 HIRAP54198 1017 aaPredicted RBP21.15■□□□□ 0.98
PSEN1-217ENST00000556533 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
PSEN1-217ENST00000556533 SCN4AP35499 1836 aa21.15■□□□□ 0.98
PSEN1-217ENST00000556533 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
PSEN1-217ENST00000556533 KIAA0825Q8IV33 1275 aa21.14■□□□□ 0.97
PSEN1-217ENST00000556533 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
PSEN1-217ENST00000556533 OGFOD1Q8N543 542 aa21.14■□□□□ 0.97
PSEN1-217ENST00000556533 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
PSEN1-217ENST00000556533 AKAP2Q9Y2D5 859 aa21.14■□□□□ 0.97
PSEN1-217ENST00000556533 MYO3BQ8WXR4 1341 aa21.13■□□□□ 0.97
PSEN1-217ENST00000556533 HSPA6P17066 643 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms