RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ZBTB42B2RXF5 422 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 SRPK2P78362 688 aaKnown RBP6.43□□□□□ -1.38
ATXN3-241ENST00000556374 TBC1D8BQ0IIM8 1120 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 OCLNQ16625 522 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 TREML1Q86YW5 311 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-241ENST00000556374 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
ATXN3-241ENST00000556374 ZNF777Q9ULD5 760 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-241ENST00000556374 MED1Q15648 1581 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-241ENST00000556374 CD109Q6YHK3 1445 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 IQSEC2Q5JU85 1478 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 XYLBO75191 536 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 PSAPP07602 524 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 TARSP26639 723 aaKnown RBP6.42□□□□□ -1.38
ATXN3-241ENST00000556374 FKBP5Q13451 457 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-241ENST00000556374 COX20Q5RI15 118 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 C16orf46Q6P387 395 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 WFDC8Q8IUA0 241 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-241ENST00000556374 TMEM130Q8N3G9 435 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 KIAA0556O60303 1618 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
ATXN3-241ENST00000556374 DISP1Q96F81 1524 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 LOC102724428A0A0B4J2F2 783 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 SASH3O75995 380 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 CPB1P15086 417 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 SIK1P57059 783 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 NLRP13Q86W25 1043 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 CLP1Q92989 425 aaKnown RBP6.41□□□□□ -1.38
ATXN3-241ENST00000556374 FNDC3AQ9Y2H6 1198 aaKnown RBP6.41□□□□□ -1.38
ATXN3-241ENST00000556374 KCNMB2Q9Y691 235 aa6.41□□□□□ -1.38
ATXN3-241ENST00000556374 LTBP4Q8N2S1 1624 aa6.4□□□□□ -1.38
ATXN3-241ENST00000556374 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-241ENST00000556374 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
ATXN3-241ENST00000556374 CXXC1Q9P0U4 656 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-241ENST00000556374 USP21Q9UK80 565 aa6.4□□□□□ -1.38
ATXN3-241ENST00000556374 RAPGEF2Q9Y4G8 1499 aa6.4□□□□□ -1.39
ATXN3-241ENST00000556374 ABCA9Q8IUA7 1624 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 GHRHP01286 108 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 RPLP1P05386 114 aaKnown RBP6.39□□□□□ -1.39
ATXN3-241ENST00000556374 PRSS36Q5K4E3 855 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 ABTB2Q8N961 1025 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 RICTORQ6R327 1708 aa6.39□□□□□ -1.39
ATXN3-241ENST00000556374 DLL1O00548 723 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 RGL4Q8IZJ4 473 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 CMTR1Q8N1G2 835 aaKnown RBP6.38□□□□□ -1.39
ATXN3-241ENST00000556374 WFDC12Q8WWY7 111 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 PLD4Q96BZ4 506 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
ATXN3-241ENST00000556374 SMG9Q9H0W8 520 aaKnown RBP6.38□□□□□ -1.39
ATXN3-241ENST00000556374 KIF27Q86VH2 1401 aa6.38□□□□□ -1.39
ATXN3-241ENST00000556374 UGGT2Q9NYU1 1516 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 FANCAO15360 1455 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 YEATS2Q9ULM3 1422 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 MMP20O60882 483 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 LGR5O75473 907 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 ARTNQ5T4W7 220 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 ETFBKMTQ8IXQ9 262 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 OR13H1Q8NG92 308 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 PBXIP1Q96AQ6 731 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
ATXN3-241ENST00000556374 EIF2AK2P19525 551 aaKnown RBP6.36□□□□□ -1.39
ATXN3-241ENST00000556374 FOXD4L6Q3SYB3 417 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-241ENST00000556374 FOXD4L3Q6VB84 417 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-241ENST00000556374 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
ATXN3-241ENST00000556374 DZIP1LQ8IYY4 767 aaKnown RBP6.36□□□□□ -1.39
ATXN3-241ENST00000556374 ZMYND15Q9H091 742 aa6.36□□□□□ -1.39
ATXN3-241ENST00000556374 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
ATXN3-241ENST00000556374 STIM2Q9P246 746 aa6.36□□□□□ -1.39
ATXN3-241ENST00000556374 ABCA8O94911 1581 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 NEO1Q92859 1461 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 CLSPNQ9HAW4 1339 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 PRMT3O60678 531 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 KIF4AO95239 1232 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 LRP8Q14114 963 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 PDE12Q6L8Q7 609 aaKnown RBP6.35□□□□□ -1.39
ATXN3-241ENST00000556374 SPACA7Q96KW9 195 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 PRIMPOLQ96LW4 560 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 ZMYM4Q5VZL5 1548 aa6.35□□□□□ -1.39
ATXN3-241ENST00000556374 PRXQ9BXM0 1461 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 PTPRTO14522 1441 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 POGZQ7Z3K3 1410 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 ARID4BQ4LE39 1312 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-241ENST00000556374 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 DEAF1O75398 565 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-241ENST00000556374 HYAL2Q12891 473 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 CDCA8Q53HL2 280 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 XKR5Q6UX68 686 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 Q6ZS46 218 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 RNF112Q9ULX5 631 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.39
ATXN3-241ENST00000556374 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms