RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 UFL1O94874 794 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 HIBADHP31937 336 aaKnown RBP11.21□□□□□ -0.61
ACTN1-218ENST00000556343 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 C15orf52Q6ZUT6 534 aaKnown RBP11.21□□□□□ -0.61
ACTN1-218ENST00000556343 ZNF804AQ7Z570 1209 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 SKAP1Q86WV1 359 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 TICAM2Q86XR7 235 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 RILPL2Q969X0 211 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 EVI5LQ96CN4 794 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
ACTN1-218ENST00000556343 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
ACTN1-218ENST00000556343 HIP1O00291 1037 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 SEMA3EO15041 775 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 ADORA1P30542 326 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-218ENST00000556343 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 TBC1D16Q8TBP0 767 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 HAUS7Q99871 368 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
ACTN1-218ENST00000556343 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
ACTN1-218ENST00000556343 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
ACTN1-218ENST00000556343 VPS33BQ9H267 617 aa11.19□□□□□ -0.62
ACTN1-218ENST00000556343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-218ENST00000556343 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 LRP5O75197 1615 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 ZBTB22O15209 634 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 C21orf2O43822 256 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 IGSF3O75054 1194 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 CDC45O75419 566 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 SDSP20132 328 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 KCNA3P22001 575 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 ARID4AP29374 1257 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 BCAMP50895 628 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 WASHC4Q2M389 1173 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 ZSCAN25Q6NSZ9 544 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 RUFY2Q8WXA3 655 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 DNAJC2Q99543 621 aaKnown RBP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 PAG1Q9NWQ8 432 aa11.18□□□□□ -0.62
ACTN1-218ENST00000556343 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-218ENST00000556343 SNAP23O00161 211 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
ACTN1-218ENST00000556343 PHKA1P46020 1223 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 GYG1P46976 350 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 ZGPATQ8N5A5 531 aaKnown RBP11.17□□□□□ -0.62
ACTN1-218ENST00000556343 SPATA5Q8NB90 893 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 PSMD1Q99460 953 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-218ENST00000556343 POLLQ9UGP5 575 aa11.17□□□□□ -0.62
ACTN1-218ENST00000556343 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
ACTN1-218ENST00000556343 MAP4K4O95819 1239 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-218ENST00000556343 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-218ENST00000556343 TMED8Q6PL24 325 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-218ENST00000556343 WDR66Q8TBY9 1149 aa11.16□□□□□ -0.62
ACTN1-218ENST00000556343 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
ACTN1-218ENST00000556343 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
ACTN1-218ENST00000556343 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
ACTN1-218ENST00000556343 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.62
ACTN1-218ENST00000556343 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 GOLIM4O00461 696 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-218ENST00000556343 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 KBTBD3Q8NAB2 608 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.62
ACTN1-218ENST00000556343 TBC1D22AQ8WUA7 517 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-218ENST00000556343 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
ACTN1-218ENST00000556343 IL1R1P14778 569 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 MCAMP43121 646 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 ZAP70P43403 619 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 SNRKQ9NRH2 765 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
ACTN1-218ENST00000556343 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
ACTN1-218ENST00000556343 KIAA2012Q0VF49 1180 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-218ENST00000556343 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 KIAA1211Q6ZU35 1233 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 RFX7Q2KHR2 1363 aa11.13□□□□□ -0.63
ACTN1-218ENST00000556343 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
ACTN1-218ENST00000556343 REC8O95072 547 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 CYP2E1P05181 493 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-218ENST00000556343 CHMLP26374 656 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 OLFM4Q6UX06 510 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 TXNRD3Q86VQ6 643 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms