RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 C15orf52Q6ZUT6 534 aaKnown RBP9.4□□□□□ -0.9
TDP1-214ENST00000556063 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 LRRCC1Q9C099 1032 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 ZNF277Q9NRM2 450 aaPredicted RBP9.4□□□□□ -0.9
TDP1-214ENST00000556063 CHD4Q14839 1912 aa9.4□□□□□ -0.9
TDP1-214ENST00000556063 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 MED23Q9ULK4 1368 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 CCDC88AQ3V6T2 1871 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 APBB1O00213 710 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 SASH1O94885 1247 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 RASSF7Q02833 373 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 AOC3Q16853 763 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 NEUROD6Q96NK8 337 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
TDP1-214ENST00000556063 RNF181Q9P0P0 153 aa9.39□□□□□ -0.91
TDP1-214ENST00000556063 IFIT2P09913 472 aaKnown RBP9.38□□□□□ -0.91
TDP1-214ENST00000556063 FGFR2P21802 821 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 HIBADHP31937 336 aaKnown RBP9.38□□□□□ -0.91
TDP1-214ENST00000556063 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
TDP1-214ENST00000556063 TNNI3KQ59H18 835 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 C9orf131Q5VYM1 1079 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 PODNQ7Z5L7 613 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 AACSQ86V21 672 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 FPGT-TNNI3KV9GXZ4 949 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 SBF1O95248 1867 aa9.38□□□□□ -0.91
TDP1-214ENST00000556063 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
TDP1-214ENST00000556063 LTBP1Q14766 1721 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 SNAP23O00161 211 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 FRAT2O75474 233 aaPredicted RBP9.37□□□□□ -0.91
TDP1-214ENST00000556063 TIMM10P62072 90 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 CCDC158Q5M9N0 1113 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 ANKRD45Q5TZF3 282 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 GPATCH3Q96I76 525 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 GPR101Q96P66 508 aaPredicted RBP9.37□□□□□ -0.91
TDP1-214ENST00000556063 BCL11AQ9H165 835 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 IL1RAPL2Q9NP60 686 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
TDP1-214ENST00000556063 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
TDP1-214ENST00000556063 SEMA3EO15041 775 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 ECE2O60344 883 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 IGHDP01880 384 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 UQCRFS1P1P0C7P4 283 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 GYG1P46976 350 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 TNIP1Q15025 636 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
TDP1-214ENST00000556063 FBXO33Q7Z6M2 555 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 EAF2Q96CJ1 260 aaPredicted RBP9.36□□□□□ -0.91
TDP1-214ENST00000556063 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 FAM84BQ96KN1 310 aaPredicted RBP9.36□□□□□ -0.91
TDP1-214ENST00000556063 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 ZNF609O15014 1411 aa9.36□□□□□ -0.91
TDP1-214ENST00000556063 WTIPA6NIX2 430 aaPredicted RBP9.35□□□□□ -0.91
TDP1-214ENST00000556063 KLRK1P26718 216 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 BCAMP50895 628 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 TTC39AQ5SRH9 613 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 B4GALNT3Q6L9W6 998 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 TXNRD3Q86VQ6 643 aa9.35□□□□□ -0.91
TDP1-214ENST00000556063 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
TDP1-214ENST00000556063 IRS2Q9Y4H2 1338 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 FZD9O00144 591 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 ZBTB22O15209 634 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
TDP1-214ENST00000556063 IL1R1P14778 569 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 ADORA1P30542 326 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 NUCB1Q02818 461 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 TDRD7Q8NHU6 1098 aaKnown RBP9.34□□□□□ -0.91
TDP1-214ENST00000556063 WDR66Q8TBY9 1149 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 TBC1D22AQ8WUA7 517 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 ZNF512BQ96KM6 892 aaPredicted RBP9.34□□□□□ -0.91
TDP1-214ENST00000556063 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 DBNLQ9UJU6 430 aaKnown RBP9.34□□□□□ -0.91
TDP1-214ENST00000556063 DENND2AQ9ULE3 1009 aa9.34□□□□□ -0.91
TDP1-214ENST00000556063 ERC2O15083 957 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 RAD17O75943 681 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 PHKA1P46020 1223 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 PRELPP51888 382 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 CXCL9Q07325 125 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 STRIP1Q5VSL9 837 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 TTLL5Q6EMB2 1281 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms