RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 LOC102724428A0A0B4J2F2 783 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 SCO2A0A1W2PP80 73 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 SIK1P57059 783 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 COX20Q5RI15 118 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
ATXN3-233ENST00000555816 MUC3BQ9H195 1237 aa8.26□□□□□ -1.09
ATXN3-233ENST00000555816 ZNF777Q9ULD5 760 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-233ENST00000555816 CMTR1Q8N1G2 835 aaKnown RBP8.25□□□□□ -1.09
ATXN3-233ENST00000555816 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
ATXN3-233ENST00000555816 ABCA8O94911 1581 aa8.25□□□□□ -1.09
ATXN3-233ENST00000555816 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-233ENST00000555816 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-233ENST00000555816 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-233ENST00000555816 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
ATXN3-233ENST00000555816 FKBP5Q13451 457 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-233ENST00000555816 RGL4Q8IZJ4 473 aa8.24□□□□□ -1.09
ATXN3-233ENST00000555816 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-233ENST00000555816 KIF21BO75037 1637 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
ATXN3-233ENST00000555816 GHRHP01286 108 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 EIF2AK2P19525 551 aaKnown RBP8.23□□□□□ -1.09
ATXN3-233ENST00000555816 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-233ENST00000555816 C16orf46Q6P387 395 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-233ENST00000555816 NLRP13Q86W25 1043 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 PLD4Q96BZ4 506 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
ATXN3-233ENST00000555816 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-233ENST00000555816 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 DLL1O00548 723 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 MMP20O60882 483 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 MLLT1Q03111 559 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-233ENST00000555816 LRP8Q14114 963 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 OCLNQ16625 522 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 PIK3R5Q8WYR1 880 aa8.22□□□□□ -1.09
ATXN3-233ENST00000555816 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
ATXN3-233ENST00000555816 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-233ENST00000555816 DEAF1O75398 565 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-233ENST00000555816 IREB2P48200 963 aaKnown RBP8.21□□□□□ -1.1
ATXN3-233ENST00000555816 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
ATXN3-233ENST00000555816 ATG7O95352 703 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 NOS3P29474 1203 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 DZIP1LQ8IYY4 767 aaKnown RBP8.2□□□□□ -1.1
ATXN3-233ENST00000555816 PRIMPOLQ96LW4 560 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
ATXN3-233ENST00000555816 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-233ENST00000555816 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
ATXN3-233ENST00000555816 PSMG3-AS1Q96PY0 264 aa8.19□□□□□ -1.1
ATXN3-233ENST00000555816 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-233ENST00000555816 J3QW42 95 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 PRMT3O60678 531 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
ATXN3-233ENST00000555816 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-233ENST00000555816 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 USP20Q9Y2K6 914 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
ATXN3-233ENST00000555816 UBAP1LF5GYI3 381 aa8.17□□□□□ -1.1
ATXN3-233ENST00000555816 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-233ENST00000555816 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
ATXN3-233ENST00000555816 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
ATXN3-233ENST00000555816 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
ATXN3-233ENST00000555816 SETDB1Q15047 1291 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 STIM2Q9P246 746 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
ATXN3-233ENST00000555816 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-233ENST00000555816 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 HYAL3O43820 417 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 HYAL2Q12891 473 aa8.15□□□□□ -1.1
ATXN3-233ENST00000555816 TTC39BQ5VTQ0 682 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
ATXN3-233ENST00000555816 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 MEGF10Q96KG7 1140 aa8.15□□□□□ -1.1
ATXN3-233ENST00000555816 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
ATXN3-233ENST00000555816 SAP130Q9H0E3 1048 aa8.15□□□□□ -1.1
ATXN3-233ENST00000555816 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-233ENST00000555816 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-233ENST00000555816 Q6ZS46 218 aa8.14□□□□□ -1.11
ATXN3-233ENST00000555816 TNFRSF10BO14763 440 aa8.13□□□□□ -1.11
ATXN3-233ENST00000555816 SMNDC1O75940 238 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-233ENST00000555816 ZAP70P43403 619 aa8.13□□□□□ -1.11
ATXN3-233ENST00000555816 GSC2O15499 205 aa8.12□□□□□ -1.11
ATXN3-233ENST00000555816 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-233ENST00000555816 PDE12Q6L8Q7 609 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms