RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 ZBTB22O15209 634 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 HIBADHP31937 336 aaKnown RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 KIAA2012Q0VF49 1180 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 CCDC158Q5M9N0 1113 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 GPATCH3Q96I76 525 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 FAM84BQ96KN1 310 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 DBNLQ9UJU6 430 aaKnown RBP15.28■□□□□ 0.04
SHMT2-221ENST00000555773 DLEC1Q9Y238 1755 aa15.28■□□□□ 0.04
SHMT2-221ENST00000555773 TAF1P21675 1872 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 IRS2Q9Y4H2 1338 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 NFKBIEO00221 500 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 YBX3P16989 372 aaKnown RBP eCLIP15.27■□□□□ 0.049e-9■□□□□ 9.1
SHMT2-221ENST00000555773 ZNF804AQ7Z570 1209 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 VPS37DQ86XT2 251 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-221ENST00000555773 COA1Q9GZY4 146 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 BCL11AQ9H165 835 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 STAP2Q9UGK3 403 aa15.27■□□□□ 0.04
SHMT2-221ENST00000555773 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 ADORA1P30542 326 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 BCAMP50895 628 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 TXNRD3Q86VQ6 643 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 ECHDC1Q9NTX5 307 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 ZNF609O15014 1411 aa15.26■□□□□ 0.03
SHMT2-221ENST00000555773 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 G3V3G9 751 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 SEMA3EO15041 775 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 MX1P20591 662 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 KLRK1P26718 216 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
SHMT2-221ENST00000555773 GYG1P46976 350 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 PODNQ7Z5L7 613 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHMT2-221ENST00000555773 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
SHMT2-221ENST00000555773 ZNF277Q9NRM2 450 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-221ENST00000555773 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
SHMT2-221ENST00000555773 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 ERC2O15083 957 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 IL1R1P14778 569 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 ATP5JP18859 108 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 PDE4AP27815 886 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 PDE1AP54750 535 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 AOC3Q16853 763 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
SHMT2-221ENST00000555773 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-221ENST00000555773 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
SHMT2-221ENST00000555773 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
SHMT2-221ENST00000555773 AOX1Q06278 1338 aa15.23■□□□□ 0.03
SHMT2-221ENST00000555773 LMNB1P20700 586 aa15.23■□□□□ 0.03
SHMT2-221ENST00000555773 ARID4AP29374 1257 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-221ENST00000555773 PHKA1P46020 1223 aa15.23■□□□□ 0.03
SHMT2-221ENST00000555773 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-221ENST00000555773 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
SHMT2-221ENST00000555773 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-221ENST00000555773 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
SHMT2-221ENST00000555773 DOK7Q18PE1 504 aa15.22■□□□□ 0.03
SHMT2-221ENST00000555773 DENND2AQ9ULE3 1009 aa15.22■□□□□ 0.03
SHMT2-221ENST00000555773 BRCA1P38398 1863 aaKnown RBP15.22■□□□□ 0.03
SHMT2-221ENST00000555773 RASSF7Q02833 373 aa15.21■□□□□ 0.03
SHMT2-221ENST00000555773 NIM1KQ8IY84 436 aa15.21■□□□□ 0.03
SHMT2-221ENST00000555773 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
SHMT2-221ENST00000555773 PDS5AQ29RF7 1337 aaKnown RBP15.2■□□□□ 0.02
SHMT2-221ENST00000555773 ECE2O60344 883 aa15.2■□□□□ 0.02
SHMT2-221ENST00000555773 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
SHMT2-221ENST00000555773 DBNDD1Q9H9R9 158 aa15.2■□□□□ 0.02
SHMT2-221ENST00000555773 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
SHMT2-221ENST00000555773 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 IGSF3O75054 1194 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 SPATA5Q8NB90 893 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 HAUS7Q99871 368 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 BOLA2Q9H3K6 86 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 LTBP1Q14766 1721 aa15.19■□□□□ 0.02
SHMT2-221ENST00000555773 FAM205AQ6ZU69 1335 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 ARFGEF1Q9Y6D6 1849 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 MCAMP43121 646 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 PRELPP51888 382 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 STRIP1Q5VSL9 837 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 TTLL5Q6EMB2 1281 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 TBC1D22AQ8WUA7 517 aa15.18■□□□□ 0.02
SHMT2-221ENST00000555773 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms