RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 TRIM7Q9C029 511 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
SYNE3-204ENST00000555759 MACROD2A1Z1Q3 448 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 PTPDC1A2A3K4 754 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
SYNE3-204ENST00000555759 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 UBXN1Q04323 297 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 SPATS2Q86XZ4 545 aaKnown RBP19.85■□□□□ 0.77
SYNE3-204ENST00000555759 KRT23Q9C075 422 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 VAMP4O75379 141 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 HAND2P61296 217 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 FANCCQ00597 558 aa19.85■□□□□ 0.77
SYNE3-204ENST00000555759 CUL7Q14999 1698 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 CTNNA2P26232 953 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
SYNE3-204ENST00000555759 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 IFT81Q8WYA0 676 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 SMC6Q96SB8 1091 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 CNNM2Q9H8M5 875 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 ZBTB7BO15156 539 aaPredicted RBP19.84■□□□□ 0.77
SYNE3-204ENST00000555759 ATP8B1O43520 1251 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 ALDH1L1O75891 902 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 SPINK5Q9NQ38 1064 aaPredicted RBP19.84■□□□□ 0.77
SYNE3-204ENST00000555759 PRAG1Q86YV5 1406 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 SLC5A1P13866 664 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 MTRF1LQ9UGC7 380 aaKnown RBP19.84■□□□□ 0.77
SYNE3-204ENST00000555759 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
SYNE3-204ENST00000555759 CCDC144CPQ8IYA2 1237 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 AOX1Q06278 1338 aa19.84■□□□□ 0.77
SYNE3-204ENST00000555759 TRIM75PA6NK02 468 aa19.83■□□□□ 0.77
SYNE3-204ENST00000555759 LLPHQ9BRT6 129 aaKnown RBP19.83■□□□□ 0.77
SYNE3-204ENST00000555759 LRRC2Q9BYS8 371 aa19.83■□□□□ 0.77
SYNE3-204ENST00000555759 GOLGA6BA6NDN3 693 aa19.83■□□□□ 0.76
SYNE3-204ENST00000555759 TNIP1Q15025 636 aa19.83■□□□□ 0.76
SYNE3-204ENST00000555759 CYP26C1Q6V0L0 522 aa19.83■□□□□ 0.76
SYNE3-204ENST00000555759 DHX32Q7L7V1 743 aaKnown RBP19.83■□□□□ 0.76
SYNE3-204ENST00000555759 TBC1D5Q92609 795 aa19.83■□□□□ 0.76
SYNE3-204ENST00000555759 BUB1BO60566 1050 aaPredicted RBP19.82■□□□□ 0.76
SYNE3-204ENST00000555759 WTAPQ15007 396 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 RPGRIP1Q96KN7 1286 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 CROCCP2Q86T23 111 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 DHX58Q96C10 678 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 EFCAB8A8MWE9 144 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 CAVIN4Q5BKX8 364 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 C8orf58Q8NAV2 365 aa19.82■□□□□ 0.76
SYNE3-204ENST00000555759 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 FAM83GA6ND36 823 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 PPFIA3O75145 1194 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 IGSF22Q8N9C0 903 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
SYNE3-204ENST00000555759 GADD45BO75293 160 aaPredicted RBP19.81■□□□□ 0.76
SYNE3-204ENST00000555759 MXRA7P84157 204 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 RTN1Q16799 776 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 RUFY4Q6ZNE9 571 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
SYNE3-204ENST00000555759 GAS2L3Q86XJ1 694 aa19.81■□□□□ 0.76
SYNE3-204ENST00000555759 KRI1Q8N9T8 703 aaKnown RBP19.81■□□□□ 0.76
SYNE3-204ENST00000555759 CCDC160A6NGH7 325 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 ATP5DP30049 168 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 ZBTB16Q05516 673 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 TSC1Q92574 1164 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 IQCGQ9H095 443 aaKnown RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 SOS1Q07889 1333 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 TMTC1Q8IUR5 882 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 IFT20Q8IY31 132 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 ZNF444Q8N0Y2 327 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 LEO1Q8WVC0 666 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 PAIP2Q9BPZ3 127 aaKnown RBP19.8■□□□□ 0.76
SYNE3-204ENST00000555759 MMRN2Q9H8L6 949 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 KIF14Q15058 1648 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 PRC1O43663 620 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 PPP1R14CQ8TAE6 165 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 ALDH3A1P30838 453 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 C8orf74Q6P047 294 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 CACNA2D3Q8IZS8 1091 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
SYNE3-204ENST00000555759 PPP1R2P41236 205 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 NLRP12P59046 1061 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 RAB11FIP4Q86YS3 637 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 CCDC26Q8TAB7 109 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 A0A1B0GVL5 298 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 ATP2A1O14983 1001 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-204ENST00000555759 GBP1P32455 592 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-204ENST00000555759 ZNF215Q9UL58 517 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-204ENST00000555759 STARD3NLO95772 234 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 SEPT6Q14141 434 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
SYNE3-204ENST00000555759 INTS8Q75QN2 995 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms