RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
LINC00641-202ENST00000555688 COL16A1Q07092 1604 aaPredicted RBP9.65□□□□□ -0.86
LINC00641-202ENST00000555688 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.86
LINC00641-202ENST00000555688 UBTFL1P0CB47 393 aaPredicted RBP9.65□□□□□ -0.86
LINC00641-202ENST00000555688 CTHP32929 405 aa9.65□□□□□ -0.86
LINC00641-202ENST00000555688 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
LINC00641-202ENST00000555688 OTUD7AQ8TE49 926 aaPredicted RBP9.65□□□□□ -0.86
LINC00641-202ENST00000555688 FMNL2Q96PY5 1086 aa9.65□□□□□ -0.86
LINC00641-202ENST00000555688 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.86
LINC00641-202ENST00000555688 ALDH1L1O75891 902 aa9.65□□□□□ -0.87
LINC00641-202ENST00000555688 GSPT1P15170 499 aaKnown RBP9.65□□□□□ -0.87
LINC00641-202ENST00000555688 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.87
LINC00641-202ENST00000555688 SSH3Q8TE77 659 aa9.65□□□□□ -0.87
LINC00641-202ENST00000555688 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.87
LINC00641-202ENST00000555688 TBC1D32Q96NH3 1257 aa9.65□□□□□ -0.87
LINC00641-202ENST00000555688 ANP32EQ9BTT0 268 aa9.65□□□□□ -0.87
LINC00641-202ENST00000555688 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
LINC00641-202ENST00000555688 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
LINC00641-202ENST00000555688 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
LINC00641-202ENST00000555688 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
LINC00641-202ENST00000555688 GLMNQ92990 594 aa9.64□□□□□ -0.87
LINC00641-202ENST00000555688 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
LINC00641-202ENST00000555688 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
LINC00641-202ENST00000555688 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
LINC00641-202ENST00000555688 AIMP1Q12904 312 aaKnown RBP9.63□□□□□ -0.87
LINC00641-202ENST00000555688 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 PPP1R42Q7Z4L9 355 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 USP35Q9P2H5 1018 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 IBTKQ9P2D0 1353 aaPredicted RBP9.63□□□□□ -0.87
LINC00641-202ENST00000555688 UTYO14607 1347 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 SALL3Q9BXA9 1300 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 KCPQ6ZWJ8 1503 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 PAPPAQ13219 1627 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 TOGARAM1Q9Y4F4 1720 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 MYL6BP14649 208 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 CWF19L2Q2TBE0 894 aaKnown RBP9.63□□□□□ -0.87
LINC00641-202ENST00000555688 TTC22Q5TAA0 569 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 XAGE3Q8WTP9 111 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
LINC00641-202ENST00000555688 TNS2Q63HR2 1409 aa9.62□□□□□ -0.87
LINC00641-202ENST00000555688 DDX58O95786 925 aaKnown RBP9.62□□□□□ -0.87
LINC00641-202ENST00000555688 SOX11P35716 441 aa9.62□□□□□ -0.87
LINC00641-202ENST00000555688 PIP4K2AP48426 406 aaPredicted RBP9.62□□□□□ -0.87
LINC00641-202ENST00000555688 MTX1Q13505 466 aa9.62□□□□□ -0.87
LINC00641-202ENST00000555688 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
LINC00641-202ENST00000555688 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
LINC00641-202ENST00000555688 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
LINC00641-202ENST00000555688 LAMB4A4D0S4 1761 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 TBC1D9Q6ZT07 1266 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 GPKOWQ92917 476 aaPredicted RBP eCLIP9.61□□□□□ -0.87
LINC00641-202ENST00000555688 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 METTL22Q9BUU2 404 aaPredicted RBP9.61□□□□□ -0.87
LINC00641-202ENST00000555688 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 ALG2Q9H553 416 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 PHLPP1O60346 1717 aa9.61□□□□□ -0.87
LINC00641-202ENST00000555688 ZBBXA8MT70 800 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
LINC00641-202ENST00000555688 PDE1AP54750 535 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 MFAP1P55081 439 aaKnown RBP9.6□□□□□ -0.87
LINC00641-202ENST00000555688 NR1H3Q13133 447 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 C22orf23Q9BZE7 217 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 UPF2Q9HAU5 1272 aaKnown RBP9.6□□□□□ -0.87
LINC00641-202ENST00000555688 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 GRM8O00222 908 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 SRGAP3O43295 1099 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 PIGBQ92521 554 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 C9orf78Q9NZ63 289 aaPredicted RBP9.6□□□□□ -0.87
LINC00641-202ENST00000555688 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
LINC00641-202ENST00000555688 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 TOM1O60784 492 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 RAB11FIP3O75154 756 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 S1PR4O95977 384 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 SDSP20132 328 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
LINC00641-202ENST00000555688 KCNC4Q03721 635 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 GCKRQ14397 625 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 PDXDC2PQ6P474 469 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
LINC00641-202ENST00000555688 ITGB4P16144 1822 aa9.59□□□□□ -0.88
LINC00641-202ENST00000555688 PTCD1O75127 700 aaKnown RBP9.58□□□□□ -0.88
LINC00641-202ENST00000555688 CDC45O75419 566 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 SURF6O75683 361 aaKnown RBP9.58□□□□□ -0.88
LINC00641-202ENST00000555688 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 A1BGP04217 495 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 FBXO45P0C2W1 286 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 PLBD2Q8NHP8 589 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 MYD88Q99836 296 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 TMOD3Q9NYL9 352 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
LINC00641-202ENST00000555688 TUBGCP6Q96RT7 1819 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms