RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PSME4Q14997 1843 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 WNT10BO00744 389 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 SREBF2Q12772 1141 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 INTS3Q68E01 1043 aaKnown RBP13.94□□□□□ -0.18
TDP1-212ENST00000555565 OTOP1Q7RTM1 612 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 PODNQ7Z5L7 613 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 TSR2Q969E8 191 aaKnown RBP13.94□□□□□ -0.18
TDP1-212ENST00000555565 MXD3Q9BW11 206 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
TDP1-212ENST00000555565 CAP1Q01518 475 aa13.93□□□□□ -0.18
TDP1-212ENST00000555565 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
TDP1-212ENST00000555565 SPRYD7Q5W111 196 aa13.93□□□□□ -0.18
TDP1-212ENST00000555565 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
TDP1-212ENST00000555565 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
TDP1-212ENST00000555565 MYD88Q99836 296 aa13.93□□□□□ -0.18
TDP1-212ENST00000555565 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
TDP1-212ENST00000555565 G3V3G9 751 aa13.92□□□□□ -0.18
TDP1-212ENST00000555565 EN2P19622 333 aaPredicted RBP13.92□□□□□ -0.18
TDP1-212ENST00000555565 TTLL12Q14166 644 aaPredicted RBP13.92□□□□□ -0.18
TDP1-212ENST00000555565 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
TDP1-212ENST00000555565 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
TDP1-212ENST00000555565 TRIM17Q9Y577 477 aa13.92□□□□□ -0.18
TDP1-212ENST00000555565 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
TDP1-212ENST00000555565 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
TDP1-212ENST00000555565 CHMP4AQ9BY43 222 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 PTPN22Q9Y2R2 807 aa13.91□□□□□ -0.18
TDP1-212ENST00000555565 XDHP47989 1333 aa13.9□□□□□ -0.18
TDP1-212ENST00000555565 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
TDP1-212ENST00000555565 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
TDP1-212ENST00000555565 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
TDP1-212ENST00000555565 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
TDP1-212ENST00000555565 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
TDP1-212ENST00000555565 PRKG1Q13976 671 aa13.9□□□□□ -0.18
TDP1-212ENST00000555565 ARMC5Q96C12 935 aa13.9□□□□□ -0.18
TDP1-212ENST00000555565 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
TDP1-212ENST00000555565 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
TDP1-212ENST00000555565 IL16Q14005 1332 aa13.9□□□□□ -0.19
TDP1-212ENST00000555565 RBBP6Q7Z6E9 1792 aaKnown RBP13.89□□□□□ -0.19
TDP1-212ENST00000555565 ANP32CO43423 234 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 SASH1O94885 1247 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 INHBEP58166 350 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
TDP1-212ENST00000555565 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 JARID2Q92833 1246 aaPredicted RBP13.89□□□□□ -0.19
TDP1-212ENST00000555565 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
TDP1-212ENST00000555565 MAP3K2Q9Y2U5 619 aa13.89□□□□□ -0.19
TDP1-212ENST00000555565 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
TDP1-212ENST00000555565 NF2P35240 595 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
TDP1-212ENST00000555565 STRIP1Q5VSL9 837 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 KSR2Q6VAB6 950 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
TDP1-212ENST00000555565 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
TDP1-212ENST00000555565 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 MANSC4A6NHS7 340 aaPredicted RBP13.87□□□□□ -0.19
TDP1-212ENST00000555565 PDE8AO60658 829 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 G2E3Q7L622 706 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 CLMNQ96JQ2 1002 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 ANGEL1Q9UNK9 670 aaKnown RBP13.87□□□□□ -0.19
TDP1-212ENST00000555565 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
TDP1-212ENST00000555565 RANBP2P49792 3224 aaKnown RBP13.86□□□□□ -0.19
TDP1-212ENST00000555565 ZBTB48P10074 688 aaPredicted RBP13.86□□□□□ -0.19
TDP1-212ENST00000555565 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 CD99L2Q8TCZ2 262 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 WNK4Q96J92 1243 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 PTPN18Q99952 460 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
TDP1-212ENST00000555565 SSC5DA1L4H1 1573 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
TDP1-212ENST00000555565 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 GJA5P36382 358 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 MMP14P50281 582 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 CRHR2Q13324 411 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
TDP1-212ENST00000555565 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 DEFB129Q9H1M3 183 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 LAMB1P07942 1786 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 MYO3BQ8WXR4 1341 aa13.85□□□□□ -0.19
TDP1-212ENST00000555565 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
TDP1-212ENST00000555565 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
TDP1-212ENST00000555565 CCT4P50991 539 aaKnown RBP13.84□□□□□ -0.19
TDP1-212ENST00000555565 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms