RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 HYPKQ9NX55 129 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 XDHP47989 1333 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 ELL2O00472 640 aaPredicted RBP10.89□□□□□ -0.67
NEK9-206ENST00000555537 PDE8AO60658 829 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 TXNRD3Q86VQ6 643 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 CFHR5Q9BXR6 569 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 ZNF609O15014 1411 aa10.89□□□□□ -0.67
NEK9-206ENST00000555537 PCCAP05165 728 aaPredicted RBP10.88□□□□□ -0.67
NEK9-206ENST00000555537 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEK9-206ENST00000555537 CAP1Q01518 475 aa10.88□□□□□ -0.67
NEK9-206ENST00000555537 KIAA0825Q8IV33 1275 aa10.88□□□□□ -0.67
NEK9-206ENST00000555537 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
NEK9-206ENST00000555537 CLMNQ96JQ2 1002 aa10.88□□□□□ -0.67
NEK9-206ENST00000555537 MINPP1Q9UNW1 487 aa10.88□□□□□ -0.67
NEK9-206ENST00000555537 PSME4Q14997 1843 aa10.87□□□□□ -0.67
NEK9-206ENST00000555537 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEK9-206ENST00000555537 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
NEK9-206ENST00000555537 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
NEK9-206ENST00000555537 PTPN22Q9Y2R2 807 aa10.87□□□□□ -0.67
NEK9-206ENST00000555537 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
NEK9-206ENST00000555537 MANSC4A6NHS7 340 aaPredicted RBP10.86□□□□□ -0.67
NEK9-206ENST00000555537 ALDH1A1P00352 501 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 HOXB7P09629 217 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 KLRK1P26718 216 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 CCT4P50991 539 aaKnown RBP10.86□□□□□ -0.67
NEK9-206ENST00000555537 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 STRIP1Q5VSL9 837 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 CCDC191Q8NCU4 936 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 WNK4Q96J92 1243 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 CWC25Q9NXE8 425 aaPredicted RBP10.86□□□□□ -0.67
NEK9-206ENST00000555537 COLQQ9Y215 455 aaPredicted RBP10.86□□□□□ -0.67
NEK9-206ENST00000555537 CENPFP49454 3210 aa10.86□□□□□ -0.67
NEK9-206ENST00000555537 MYCP01106 439 aaPredicted RBP10.85□□□□□ -0.67
NEK9-206ENST00000555537 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
NEK9-206ENST00000555537 GJA5P36382 358 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 INHBEP58166 350 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 GTF2IP78347 998 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 CRHR2Q13324 411 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 APOBEC3FQ8IUX4 373 aaKnown RBP10.85□□□□□ -0.67
NEK9-206ENST00000555537 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 ZBED3Q96IU2 234 aaPredicted RBP10.85□□□□□ -0.67
NEK9-206ENST00000555537 COA1Q9GZY4 146 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 GREM2Q9H772 168 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 BSDC1Q9NW68 430 aaPredicted RBP10.85□□□□□ -0.67
NEK9-206ENST00000555537 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
NEK9-206ENST00000555537 CTSWP56202 376 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 ERO1AQ96HE7 468 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 CDC5LQ99459 802 aaKnown RBP10.84□□□□□ -0.67
NEK9-206ENST00000555537 PTPN18Q99952 460 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 METTL22Q9BUU2 404 aaPredicted RBP10.84□□□□□ -0.67
NEK9-206ENST00000555537 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 BRCA2P51587 3418 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
NEK9-206ENST00000555537 HTTP42858 3142 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 F8W031 263 aaPredicted RBP10.83□□□□□ -0.68
NEK9-206ENST00000555537 SNAP23O00161 211 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 SP3Q02447 781 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 DLGAP5Q15398 846 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 NBPF12Q5TAG4 269 aaPredicted RBP10.83□□□□□ -0.68
NEK9-206ENST00000555537 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 RUNDC1Q96C34 613 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 ZNF646O15015 1829 aaPredicted RBP10.83□□□□□ -0.68
NEK9-206ENST00000555537 AOX1Q06278 1338 aa10.83□□□□□ -0.68
NEK9-206ENST00000555537 PPP1R12BO60237 982 aaPredicted RBP10.82□□□□□ -0.68
NEK9-206ENST00000555537 USP2O75604 605 aaPredicted RBP10.82□□□□□ -0.68
NEK9-206ENST00000555537 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 ZBTB48P10074 688 aaPredicted RBP10.82□□□□□ -0.68
NEK9-206ENST00000555537 MAP3K11Q16584 847 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 PRMT6Q96LA8 375 aaPredicted RBP10.82□□□□□ -0.68
NEK9-206ENST00000555537 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 LEMD3Q9Y2U8 911 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 ZNF804BA4D1E1 1349 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 SSC5DA1L4H1 1573 aa10.82□□□□□ -0.68
NEK9-206ENST00000555537 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 CWF19L2Q2TBE0 894 aaKnown RBP10.81□□□□□ -0.68
NEK9-206ENST00000555537 SLC4A8Q2Y0W8 1093 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 VEZTQ9HBM0 779 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 CD209Q9NNX6 404 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 JAG2Q9Y219 1238 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 PTCH2Q9Y6C5 1203 aa10.81□□□□□ -0.68
NEK9-206ENST00000555537 PI4KAP2A4QPH2 592 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 H0YGN5 161 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 TAF5LO75529 589 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
NEK9-206ENST00000555537 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 IGHMBP2P38935 993 aaKnown RBP10.8□□□□□ -0.68
NEK9-206ENST00000555537 SUPT20HL1Q3ZLR7 823 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms