RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	KRT26	Q7Z3Y9	468 aa		12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	FTSJ3	Q8IY81	847 aa	Known RBP	12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	MPND	Q8N594	471 aa		12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	CCDC102A	Q96A19	550 aa		12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	CWC25	Q9NXE8	425 aa	Predicted RBP	12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	HPS5	Q9UPZ3	1129 aa		12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.1	□□□□□ -0.47
PRKCH-215	ENST00000555382		H7C1D1	291 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382		H7C1W4	665 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	PSMD14	O00487	310 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	PCCA	P05165	728 aa	Predicted RBP	12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	RLBP1	P12271	317 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	GRAP	Q13588	217 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	RASAL3	Q86YV0	1011 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	GRAPL	Q8TC17	118 aa	Predicted RBP	12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	MYD88	Q99836	296 aa		12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	UTP14A	Q9BVJ6	771 aa	Known RBP	12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	RANBP2	P49792	3224 aa	Known RBP	12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	ASTN2	O75129	1339 aa	Predicted RBP	12.09	□□□□□ -0.47
PRKCH-215	ENST00000555382	GRM8	O00222	908 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	GNAI3	P08754	354 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	ZNF157	P51786	506 aa	Predicted RBP	12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	CASP7	P55210	303 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	MVP	Q14764	893 aa	Known RBP	12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	SLC4A10	Q6U841	1118 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	PLA2G12B	Q9BX93	195 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	USP44	Q9H0E7	712 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	KCNQ5	Q9NR82	932 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	DDX19B	Q9UMR2	479 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	SH3TC1	Q8TE82	1336 aa		12.08	□□□□□ -0.48
PRKCH-215	ENST00000555382	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	ZBTB7B	O15156	539 aa	Predicted RBP	12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	PLIN1	O60240	522 aa		12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	HCLS1	P14317	486 aa	Predicted RBP	12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	RPS12	P25398	132 aa	Known RBP	12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	TMEM57	Q8N5G2	664 aa		12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	LAMB1	P07942	1786 aa		12.07	□□□□□ -0.48
PRKCH-215	ENST00000555382	ATP5J2-PTCD1	G3V325	749 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	CWF19L2	Q2TBE0	894 aa	Known RBP	12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	TMC4	Q7Z404	712 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	C2orf69	Q8N8R5	385 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	CLUAP1	Q96AJ1	413 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	CDCA5	Q96FF9	252 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	GGA3	Q9NZ52	723 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	POLL	Q9UGP5	575 aa		12.06	□□□□□ -0.48
PRKCH-215	ENST00000555382	ZNF280A	P59817	542 aa	Predicted RBP	12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	NOM1	Q5C9Z4	860 aa	Known RBP	12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	PANK1	Q8TE04	598 aa		12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	DBNDD1	Q9H9R9	158 aa		12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	ZBTB40	Q9NUA8	1239 aa		12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.05	□□□□□ -0.48
PRKCH-215	ENST00000555382	VIL1	P09327	827 aa	Known RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	PKN2	Q16513	984 aa	Known RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	KIF4B	Q2VIQ3	1234 aa		12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	C20orf194	Q5TEA3	1177 aa		12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	ERICH6B	Q5W0A0	696 aa		12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	DDX46	Q7L014	1031 aa	Known RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	REM2	Q8IYK8	340 aa	Predicted RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	CELF1	Q92879	486 aa	Known RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	TMX4	Q9H1E5	349 aa	Predicted RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	TRMT112	Q9UI30	125 aa	Known RBP	12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	TNN	Q9UQP3	1299 aa		12.04	□□□□□ -0.48
PRKCH-215	ENST00000555382	ECE2	O60344	883 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	FKBP1B	P68106	108 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	GPSM2	P81274	684 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	MTX1	Q13505	466 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	SF3B3	Q15393	1217 aa	Known RBP	12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	WASHC4	Q2M389	1173 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	RABL6	Q3YEC7	729 aa	Predicted RBP	12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	ITPRIP	Q8IWB1	547 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	DCPS	Q96C86	337 aa	Known RBP	12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	GML	Q99445	158 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	CFHR5	Q9BXR6	569 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	COG6	Q9Y2V7	657 aa		12.03	□□□□□ -0.48
PRKCH-215	ENST00000555382	PDE8A	O60658	829 aa		12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	CSF1R	P07333	972 aa		12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	UBTFL1	P0CB47	393 aa	Predicted RBP	12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	HABP4	Q5JVS0	413 aa	Known RBP	12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	UBE3B	Q7Z3V4	1068 aa		12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	FAM89A	Q96GI7	184 aa		12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	KIAA0100	Q14667	2235 aa	Known RBP	12.02	□□□□□ -0.49
PRKCH-215	ENST00000555382	IRS4	O14654	1257 aa	Predicted RBP	12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	GNAI2	P04899	355 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	MOB2	Q70IA6	237 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	SULF1	Q8IWU6	871 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	TBC1D16	Q8TBP0	767 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	KAZALD1	Q96I82	304 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	MEIS3	Q99687	375 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	PITPNM2	Q9BZ72	1349 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	CEP290	O15078	2479 aa		12.01	□□□□□ -0.49
PRKCH-215	ENST00000555382	TBC1D8	O95759	1140 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	TM4SF4	P48230	202 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	FOXO4	P98177	505 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	DOK7	Q18PE1	504 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	RBM26	Q5T8P6	1007 aa	Known RBP	12	□□□□□ -0.49
PRKCH-215	ENST00000555382	ANGEL2	Q5VTE6	544 aa	Known RBP	12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms