RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PSME4Q14997 1843 aa15.08■□□□□ 0.01
SRP54-206ENST00000555317 USP17L3A6NCW0 530 aa15.08■□□□□ 0
SRP54-206ENST00000555317 USP17L4A6NCW7 530 aa15.08■□□□□ 0
SRP54-206ENST00000555317 WTIPA6NIX2 430 aaPredicted RBP15.08■□□□□ 0
SRP54-206ENST00000555317 USP50Q70EL3 339 aaPredicted RBP15.08■□□□□ 0
SRP54-206ENST00000555317 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
SRP54-206ENST00000555317 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
SRP54-206ENST00000555317 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
SRP54-206ENST00000555317 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
SRP54-206ENST00000555317 SRGAP3O43295 1099 aa15.07■□□□□ 0
SRP54-206ENST00000555317 POTEIP0CG38 1075 aa15.07■□□□□ 0
SRP54-206ENST00000555317 POTEJP0CG39 1038 aa15.07■□□□□ 0
SRP54-206ENST00000555317 KLRK1P26718 216 aa15.07■□□□□ 0
SRP54-206ENST00000555317 APLP1P51693 650 aa15.07■□□□□ 0
SRP54-206ENST00000555317 UBE4AQ14139 1066 aa15.07■□□□□ 0
SRP54-206ENST00000555317 LRRC24Q50LG9 513 aa15.07■□□□□ 0
SRP54-206ENST00000555317 VPS37DQ86XT2 251 aa15.07■□□□□ 0
SRP54-206ENST00000555317 MICALL2Q8IY33 904 aa15.07■□□□□ 0
SRP54-206ENST00000555317 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
SRP54-206ENST00000555317 DPF2Q92785 391 aa15.07■□□□□ 0
SRP54-206ENST00000555317 SIL1Q9H173 461 aa15.07■□□□□ 0
SRP54-206ENST00000555317 KCNQ5Q9NR82 932 aa15.07■□□□□ 0
SRP54-206ENST00000555317 RIPOR2Q9Y4F9 1068 aa15.07■□□□□ 0
SRP54-206ENST00000555317 SNAP23O00161 211 aa15.06■□□□□ 0
SRP54-206ENST00000555317 EYA2O00167 538 aa15.06■□□□□ 0
SRP54-206ENST00000555317 VIL1P09327 827 aaKnown RBP15.06■□□□□ 0
SRP54-206ENST00000555317 RSBN1LQ6PCB5 846 aaPredicted RBP15.06■□□□□ 0
SRP54-206ENST00000555317 C15orf52Q6ZUT6 534 aaKnown RBP15.06■□□□□ 0
SRP54-206ENST00000555317 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
SRP54-206ENST00000555317 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
SRP54-206ENST00000555317 FBXO3Q9UK99 471 aa15.06■□□□□ 0
SRP54-206ENST00000555317 PTPN12Q05209 780 aaKnown RBP15.05■□□□□ -0
SRP54-206ENST00000555317 PUM3Q15397 648 aaKnown RBP15.05■□□□□ -0
SRP54-206ENST00000555317 MYO3BQ8WXR4 1341 aa15.05■□□□□ -0
SRP54-206ENST00000555317 CIAO1O76071 339 aa15.04■□□□□ -0
SRP54-206ENST00000555317 PDE8BO95263 885 aa15.04■□□□□ -0
SRP54-206ENST00000555317 IFIT1P09914 478 aaKnown RBP15.04■□□□□ -0
SRP54-206ENST00000555317 RLBP1P12271 317 aa15.04■□□□□ -0
SRP54-206ENST00000555317 RFX5P48382 616 aaPredicted RBP15.04■□□□□ -0
SRP54-206ENST00000555317 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
SRP54-206ENST00000555317 STRIP1Q5VSL9 837 aa15.04■□□□□ -0
SRP54-206ENST00000555317 TTLL5Q6EMB2 1281 aa15.04■□□□□ -0
SRP54-206ENST00000555317 PANK1Q8TE04 598 aa15.04■□□□□ -0
SRP54-206ENST00000555317 CD209Q9NNX6 404 aa15.04■□□□□ -0
SRP54-206ENST00000555317 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
SRP54-206ENST00000555317 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
SRP54-206ENST00000555317 USP17L8P0C7I0 530 aa15.03■□□□□ -0
SRP54-206ENST00000555317 SLC5A1P13866 664 aa15.03■□□□□ -0
SRP54-206ENST00000555317 HIBADHP31937 336 aaKnown RBP15.03■□□□□ -0
SRP54-206ENST00000555317 IL15P40933 162 aaPredicted RBP15.03■□□□□ -0
SRP54-206ENST00000555317 GTF2IP78347 998 aa15.03■□□□□ -0
SRP54-206ENST00000555317 MTX1Q13505 466 aa15.03■□□□□ -0
SRP54-206ENST00000555317 TBC1D10BQ4KMP7 808 aaPredicted RBP15.03■□□□□ -0
SRP54-206ENST00000555317 MAP1SQ66K74 1059 aaPredicted RBP15.03■□□□□ -0
SRP54-206ENST00000555317 OGFOD1Q8N543 542 aa15.03■□□□□ -0
SRP54-206ENST00000555317 CHMP4BQ9H444 224 aaKnown RBP15.03■□□□□ -0
SRP54-206ENST00000555317 CEP126Q9P2H0 1117 aa15.03■□□□□ -0
SRP54-206ENST00000555317 ZNF609O15014 1411 aa15.02■□□□□ -0
SRP54-206ENST00000555317 GYG1P46976 350 aa15.02■□□□□ -0
SRP54-206ENST00000555317 KIF4BQ2VIQ3 1234 aa15.02■□□□□ -0
SRP54-206ENST00000555317 DACT2Q5SW24 774 aa15.02■□□□□ -0
SRP54-206ENST00000555317 RBM26Q5T8P6 1007 aaKnown RBP15.02■□□□□ -0
SRP54-206ENST00000555317 CNTROBQ8N137 903 aa15.02■□□□□ -0
SRP54-206ENST00000555317 TRPM4Q8TD43 1214 aa15.02■□□□□ -0
SRP54-206ENST00000555317 COPRSQ9NQ92 184 aa15.02■□□□□ -0
SRP54-206ENST00000555317 HDAC9Q9UKV0 1011 aa15.02■□□□□ -0
SRP54-206ENST00000555317 PA2G4Q9UQ80 394 aaKnown RBP15.02■□□□□ -0
SRP54-206ENST00000555317 IRS2Q9Y4H2 1338 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 SHTN1A0MZ66 631 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 IL1R1P14778 569 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 SAMD7Q7Z3H4 446 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 VGLL2Q8N8G2 317 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 ZC3H15Q8WU90 426 aaKnown RBP15.01□□□□□ -0.01
SRP54-206ENST00000555317 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
SRP54-206ENST00000555317 MMP14P50281 582 aa15□□□□□ -0.01
SRP54-206ENST00000555317 G3BP1Q13283 466 aaKnown RBP eCLIP15□□□□□ -0.01
SRP54-206ENST00000555317 OS9Q13438 667 aaPredicted RBP15□□□□□ -0.01
SRP54-206ENST00000555317 MVPQ14764 893 aaKnown RBP15□□□□□ -0.01
SRP54-206ENST00000555317 ATP2B3Q16720 1220 aa15□□□□□ -0.01
SRP54-206ENST00000555317 ATG9AQ7Z3C6 839 aa15□□□□□ -0.01
SRP54-206ENST00000555317 LPIN2Q92539 896 aa15□□□□□ -0.01
SRP54-206ENST00000555317 MYH13Q9UKX3 1938 aa15□□□□□ -0.01
SRP54-206ENST00000555317 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
SRP54-206ENST00000555317 ZNF280AP59817 542 aaPredicted RBP14.99□□□□□ -0.01
SRP54-206ENST00000555317 DCPSQ96C86 337 aaKnown RBP14.99□□□□□ -0.01
SRP54-206ENST00000555317 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
SRP54-206ENST00000555317 MXD3Q9BW11 206 aa14.99□□□□□ -0.01
SRP54-206ENST00000555317 MYOZ2Q9NPC6 264 aa14.99□□□□□ -0.01
SRP54-206ENST00000555317 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
SRP54-206ENST00000555317 JAG2Q9Y219 1238 aa14.99□□□□□ -0.01
SRP54-206ENST00000555317 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
SRP54-206ENST00000555317 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
SRP54-206ENST00000555317 SASH1O94885 1247 aa14.98□□□□□ -0.01
SRP54-206ENST00000555317 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
SRP54-206ENST00000555317 KIAA0825Q8IV33 1275 aa14.98□□□□□ -0.01
SRP54-206ENST00000555317 GMLQ99445 158 aa14.98□□□□□ -0.01
SRP54-206ENST00000555317 AKAP2Q9Y2D5 859 aa14.98□□□□□ -0.01
SRP54-206ENST00000555317 ZNF646O15015 1829 aaPredicted RBP14.98□□□□□ -0.01
SRP54-206ENST00000555317 PASKQ96RG2 1323 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms