RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 IQGAP3Q86VI3 1631 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 ABCA3Q99758 1704 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 PROCP04070 461 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-226ENST00000554350 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 NIFKQ9BYG3 293 aaKnown RBP8.68□□□□□ -1.02
ATXN3-226ENST00000554350 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 GDF2Q9UK05 429 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-226ENST00000554350 ARHGEF10O15013 1369 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 NAIPQ13075 1403 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 ATP10DQ9P241 1426 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
ATXN3-226ENST00000554350 E9PCH4 1651 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 BMP4P12644 408 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 COL8A1P27658 744 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 COL14A1Q05707 1796 aaKnown RBP8.67□□□□□ -1.02
ATXN3-226ENST00000554350 SPATA31A1Q5TZJ5 1347 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 SLCO4C1Q6ZQN7 724 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 C1orf216Q8TAB5 229 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 PRDM11Q9NQV5 511 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
ATXN3-226ENST00000554350 KIF1AQ12756 1690 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 A6NJY4 79 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 CDK2AP1O14519 115 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 LINC00114Q6XXX2 140 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 PCDHGC4Q9Y5F7 938 aa8.66□□□□□ -1.02
ATXN3-226ENST00000554350 RRBP1Q9P2E9 1410 aaKnown RBP8.65□□□□□ -1.02
ATXN3-226ENST00000554350 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
ATXN3-226ENST00000554350 KRBA1A5PL33 1030 aa8.65□□□□□ -1.02
ATXN3-226ENST00000554350 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
ATXN3-226ENST00000554350 TECPR2O15040 1411 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 A0A1W2PNR3 127 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 MSTNO14793 375 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 TNP2Q05952 138 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 WAPLQ7Z5K2 1190 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 AIDAQ96BJ3 306 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 STK26Q9P289 416 aa8.64□□□□□ -1.03
ATXN3-226ENST00000554350 SBNO1A3KN83 1393 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ATXN7O15265 892 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-226ENST00000554350 GRIN3BO60391 1043 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ARAFP10398 606 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 EPXP11678 715 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 EVA1CP58658 441 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 CHRNA2Q15822 529 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ZIC5Q96T25 663 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 MKL2Q9ULH7 1088 aa8.63□□□□□ -1.03
ATXN3-226ENST00000554350 PLSCR1O15162 318 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
ATXN3-226ENST00000554350 SKIP12755 728 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 EPHA4P54764 986 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 SLC15A2Q16348 729 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 KANK4Q5T7N3 995 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-226ENST00000554350 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 SUV39H2Q9H5I1 410 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
ATXN3-226ENST00000554350 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 CD33P20138 364 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 GTF2IP78347 998 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 NCOA4Q13772 614 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 EML3Q32P44 896 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 DNAJC5GQ8N7S2 189 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATXN3-226ENST00000554350 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-226ENST00000554350 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
ATXN3-226ENST00000554350 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 NEURL1BA8MQ27 555 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 TXLNAP40222 546 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 DGKGP49619 791 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 NBPF1Q3BBV0 1214 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
ATXN3-226ENST00000554350 EFSO43281 561 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 FAM157BP0CG42 384 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATXN3-226ENST00000554350 POLD1P28340 1107 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-226ENST00000554350 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 TCP11L2Q8N4U5 519 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 NUP155O75694 1391 aa8.59□□□□□ -1.03
ATXN3-226ENST00000554350 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-226ENST00000554350 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms