RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
NEDD1-206ENST00000554226 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
NEDD1-206ENST00000554226 MKRN3Q13064 507 aaKnown RBP17.97■□□□□ 0.47
NEDD1-206ENST00000554226 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
NEDD1-206ENST00000554226 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
NEDD1-206ENST00000554226 OGFOD1Q8N543 542 aa17.97■□□□□ 0.47
NEDD1-206ENST00000554226 CENPFP49454 3210 aa17.96■□□□□ 0.47
NEDD1-206ENST00000554226 ECM29Q5VYK3 1845 aa17.96■□□□□ 0.47
NEDD1-206ENST00000554226 POTEFA5A3E0 1075 aa17.96■□□□□ 0.47
NEDD1-206ENST00000554226 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-206ENST00000554226 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
NEDD1-206ENST00000554226 CWC25Q9NXE8 425 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-206ENST00000554226 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
NEDD1-206ENST00000554226 FXR1P51114 621 aaKnown RBP eCLIP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 INHBEP58166 350 aa17.95■□□□□ 0.46
NEDD1-206ENST00000554226 INTS3Q68E01 1043 aaKnown RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 CDC5LQ99459 802 aaKnown RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 LAS1LQ9Y4W2 734 aaKnown RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 KIAA0100Q14667 2235 aaKnown RBP17.95■□□□□ 0.46
NEDD1-206ENST00000554226 PTPN12Q05209 780 aaKnown RBP17.94■□□□□ 0.46
NEDD1-206ENST00000554226 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 SPRYD7Q5W111 196 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 OTOP1Q7RTM1 612 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 ARMC9Q7Z3E5 817 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 APOBEC3FQ8IUX4 373 aaKnown RBP17.94■□□□□ 0.46
NEDD1-206ENST00000554226 MYD88Q99836 296 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 COA1Q9GZY4 146 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
NEDD1-206ENST00000554226 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
NEDD1-206ENST00000554226 UNCXA6NJT0 531 aa17.93■□□□□ 0.46
NEDD1-206ENST00000554226 CTSWP56202 376 aa17.93■□□□□ 0.46
NEDD1-206ENST00000554226 MAP3K11Q16584 847 aa17.93■□□□□ 0.46
NEDD1-206ENST00000554226 METTL22Q9BUU2 404 aaPredicted RBP17.93■□□□□ 0.46
NEDD1-206ENST00000554226 MINPP1Q9UNW1 487 aa17.93■□□□□ 0.46
NEDD1-206ENST00000554226 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
NEDD1-206ENST00000554226 BRCA2P51587 3418 aa17.92■□□□□ 0.46
NEDD1-206ENST00000554226 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-206ENST00000554226 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-206ENST00000554226 ZBTB48P10074 688 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-206ENST00000554226 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
NEDD1-206ENST00000554226 CCDC146Q8IYE0 955 aa17.92■□□□□ 0.46
NEDD1-206ENST00000554226 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
NEDD1-206ENST00000554226 SASH1O94885 1247 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 IFNL1Q8IU54 200 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-206ENST00000554226 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 CHMP4AQ9BY43 222 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 LEMD3Q9Y2U8 911 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 SSC5DA1L4H1 1573 aa17.9■□□□□ 0.46
NEDD1-206ENST00000554226 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
NEDD1-206ENST00000554226 PRKG1Q13976 671 aa17.89■□□□□ 0.45
NEDD1-206ENST00000554226 MTMR14Q8NCE2 650 aa17.89■□□□□ 0.45
NEDD1-206ENST00000554226 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
NEDD1-206ENST00000554226 PPP2R3BQ9Y5P8 575 aa17.89■□□□□ 0.45
NEDD1-206ENST00000554226 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
NEDD1-206ENST00000554226 TXNRD3Q86VQ6 643 aa17.88■□□□□ 0.45
NEDD1-206ENST00000554226 ARMC5Q96C12 935 aa17.88■□□□□ 0.45
NEDD1-206ENST00000554226 GREM2Q9H772 168 aa17.88■□□□□ 0.45
NEDD1-206ENST00000554226 ANGEL1Q9UNK9 670 aaKnown RBP17.88■□□□□ 0.45
NEDD1-206ENST00000554226 PTPN22Q9Y2R2 807 aa17.88■□□□□ 0.45
NEDD1-206ENST00000554226 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
NEDD1-206ENST00000554226 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
NEDD1-206ENST00000554226 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
NEDD1-206ENST00000554226 TTLL5Q6EMB2 1281 aa17.87■□□□□ 0.45
NEDD1-206ENST00000554226 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
NEDD1-206ENST00000554226 DEFB129Q9H1M3 183 aa17.87■□□□□ 0.45
NEDD1-206ENST00000554226 CEP290O15078 2479 aa17.86■□□□□ 0.45
NEDD1-206ENST00000554226 EN2P19622 333 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-206ENST00000554226 GNAI1P63096 354 aa17.86■□□□□ 0.45
NEDD1-206ENST00000554226 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
NEDD1-206ENST00000554226 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
NEDD1-206ENST00000554226 WNK4Q96J92 1243 aa17.86■□□□□ 0.45
NEDD1-206ENST00000554226 ZNF804BA4D1E1 1349 aa17.86■□□□□ 0.45
NEDD1-206ENST00000554226 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
NEDD1-206ENST00000554226 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 KIAA0825Q8IV33 1275 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 CD99L2Q8TCZ2 262 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 SLC10A4Q96EP9 437 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 ANKRD2Q9GZV1 360 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 OTOFQ9HC10 1997 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 FZD1Q9UP38 647 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 MAP3K2Q9Y2U5 619 aa17.85■□□□□ 0.45
NEDD1-206ENST00000554226 IRS2Q9Y4H2 1338 aa17.84■□□□□ 0.45
NEDD1-206ENST00000554226 TESPA1A2RU30 521 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-206ENST00000554226 PPP1R12BO60237 982 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-206ENST00000554226 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
NEDD1-206ENST00000554226 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
NEDD1-206ENST00000554226 PLA2G12BQ9BX93 195 aa17.84■□□□□ 0.45
NEDD1-206ENST00000554226 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-206ENST00000554226 KLRK1P26718 216 aa17.83■□□□□ 0.44
NEDD1-206ENST00000554226 C15orf52Q6ZUT6 534 aaKnown RBP17.83■□□□□ 0.44
NEDD1-206ENST00000554226 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
NEDD1-206ENST00000554226 CLMNQ96JQ2 1002 aa17.83■□□□□ 0.44
NEDD1-206ENST00000554226 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 H7C1W4 665 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 IGHMBP2P38935 993 aaKnown RBP17.82■□□□□ 0.44
NEDD1-206ENST00000554226 GTF2IP78347 998 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms