RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 SDSP20132 328 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 NRXN2Q9P2S2 1712 aa12.73□□□□□ -0.37
TMEM55B-205ENST00000554028 CDC45O75419 566 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 CHRNA5P30532 468 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 LRRFIP1Q32MZ4 808 aaKnown RBP12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
TMEM55B-205ENST00000554028 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 LRP5O75197 1615 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 ADORA1P30542 326 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 CCDC102BQ68D86 513 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 MPNDQ8N594 471 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 TTLL6Q8N841 843 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 HAUS7Q99871 368 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 PODXL2Q9NZ53 605 aa12.71□□□□□ -0.37
TMEM55B-205ENST00000554028 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 A0A0G2JLW4 131 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 C6orf229H3BNL8 230 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 HIP1O00291 1037 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 UFL1O94874 794 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 GPSM2P81274 684 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 EYA3Q99504 573 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 DNAJC2Q99543 621 aaKnown RBP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
TMEM55B-205ENST00000554028 G3V3G9 751 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 DPEP1P16444 411 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 HIBADHP31937 336 aaKnown RBP12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 ZNF804AQ7Z570 1209 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 TICAM2Q86XR7 235 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
TMEM55B-205ENST00000554028 SNAP23O00161 211 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 SEMA3EO15041 775 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 PTGER2P43116 358 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 PHKA1P46020 1223 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 BCAMP50895 628 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 PAG1Q9NWQ8 432 aa12.68□□□□□ -0.38
TMEM55B-205ENST00000554028 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 GOLIM4O00461 696 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 GYG1P46976 350 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 RTKN2Q8IZC4 609 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
TMEM55B-205ENST00000554028 ZAP70P43403 619 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 KBTBD3Q8NAB2 608 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 SNRKQ9NRH2 765 aa12.66□□□□□ -0.38
TMEM55B-205ENST00000554028 C21orf2O43822 256 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 ZFYP08048 801 aaPredicted RBP12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 CHMLP26374 656 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 MCAMP43121 646 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 POLLQ9UGP5 575 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
TMEM55B-205ENST00000554028 ZBTB22O15209 634 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 REC8O95072 547 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 KCNA3P22001 575 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 EVX2Q03828 476 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 MAP3K12Q12852 859 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms