RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
PSMC6-205ENST00000553899 ZC3H4Q9UPT8 1303 aaKnown RBP16.73■□□□□ 0.27
PSMC6-205ENST00000553899 UTRNP46939 3433 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 ZNF609O15014 1411 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
PSMC6-205ENST00000553899 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
PSMC6-205ENST00000553899 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
PSMC6-205ENST00000553899 IARSP41252 1262 aaKnown RBP16.72■□□□□ 0.27
PSMC6-205ENST00000553899 FBXO33Q7Z6M2 555 aa16.72■□□□□ 0.27
PSMC6-205ENST00000553899 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
PSMC6-205ENST00000553899 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
PSMC6-205ENST00000553899 SEMA3EO15041 775 aa16.71■□□□□ 0.27
PSMC6-205ENST00000553899 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
PSMC6-205ENST00000553899 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
PSMC6-205ENST00000553899 FAM84BQ96KN1 310 aaPredicted RBP16.71■□□□□ 0.27
PSMC6-205ENST00000553899 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
PSMC6-205ENST00000553899 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 IGSF3O75054 1194 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 IL1R1P14778 569 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 HIBADHP31937 336 aaKnown RBP16.7■□□□□ 0.26
PSMC6-205ENST00000553899 TIMM10P62072 90 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 XAGE2Q96GT9 111 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 GNL3LQ9NVN8 582 aaKnown RBP16.7■□□□□ 0.26
PSMC6-205ENST00000553899 CHD4Q14839 1912 aa16.7■□□□□ 0.26
PSMC6-205ENST00000553899 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
PSMC6-205ENST00000553899 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
PSMC6-205ENST00000553899 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
PSMC6-205ENST00000553899 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
PSMC6-205ENST00000553899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
PSMC6-205ENST00000553899 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 AACSQ86V21 672 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
PSMC6-205ENST00000553899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
PSMC6-205ENST00000553899 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 ZNF277Q9NRM2 450 aaPredicted RBP16.68■□□□□ 0.26
PSMC6-205ENST00000553899 DBNLQ9UJU6 430 aaKnown RBP16.68■□□□□ 0.26
PSMC6-205ENST00000553899 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 PSME4Q14997 1843 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 TTC41PQ6P2S7 1318 aa16.68■□□□□ 0.26
PSMC6-205ENST00000553899 WTIPA6NIX2 430 aaPredicted RBP16.67■□□□□ 0.26
PSMC6-205ENST00000553899 SNAP23O00161 211 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
PSMC6-205ENST00000553899 MMP14P50281 582 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 CCDC102BQ68D86 513 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 CD209Q9NNX6 404 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
PSMC6-205ENST00000553899 FZD9O00144 591 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 APBB1O00213 710 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 FKBP1AP62942 108 aaKnown RBP16.66■□□□□ 0.26
PSMC6-205ENST00000553899 AOC3Q16853 763 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 NIM1KQ8IY84 436 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 AOX1Q06278 1338 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 FAM205AQ6ZU69 1335 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
PSMC6-205ENST00000553899 G3V3G9 751 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 ATP5JP18859 108 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 KLRK1P26718 216 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 GYG1P46976 350 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 PRELPP51888 382 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
PSMC6-205ENST00000553899 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
PSMC6-205ENST00000553899 RIMBP2O15034 1052 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 ECE2O60344 883 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 ADORA1P30542 326 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 BCAMP50895 628 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 RASSF7Q02833 373 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 DBNDD2Q9BQY9 259 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
PSMC6-205ENST00000553899 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.25
PSMC6-205ENST00000553899 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 ERC2O15083 957 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
PSMC6-205ENST00000553899 MX1P20591 662 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 TNIP1Q15025 636 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 TBC1D22AQ8WUA7 517 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
PSMC6-205ENST00000553899 COL4A5P29400 1685 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 USP17L3A6NCW0 530 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms