RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PDE4CQ08493 712 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 C8orf34Q49A92 452 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 COL13A1Q5TAT6 717 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-210ENST00000553693 IGF2-ASQ6U949 168 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 NCAPG2Q86XI2 1143 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 RNF112Q9ULX5 631 aa7.93□□□□□ -1.14
SCFD1-210ENST00000553693 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
SCFD1-210ENST00000553693 DEAF1O75398 565 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-210ENST00000553693 ATP11AP98196 1134 aa7.92□□□□□ -1.14
SCFD1-210ENST00000553693 EHHADHQ08426 723 aa7.92□□□□□ -1.14
SCFD1-210ENST00000553693 PMEPA1Q969W9 287 aa7.92□□□□□ -1.14
SCFD1-210ENST00000553693 EGFL7Q9UHF1 273 aa7.92□□□□□ -1.14
SCFD1-210ENST00000553693 SUPT5HO00267 1087 aaKnown RBP7.91□□□□□ -1.14
SCFD1-210ENST00000553693 DLL1O00548 723 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 CYP2E1P05181 493 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-210ENST00000553693 CES1P23141 567 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 ZNF211Q13398 564 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-210ENST00000553693 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 PBX4Q9BYU1 374 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 RASSF4Q9H2L5 321 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 POLIQ9UNA4 740 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
SCFD1-210ENST00000553693 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
SCFD1-210ENST00000553693 MRPL18Q9H0U6 180 aaKnown RBP7.9□□□□□ -1.14
SCFD1-210ENST00000553693 GGNBP2Q9H3C7 697 aa7.9□□□□□ -1.14
SCFD1-210ENST00000553693 KANSL3Q9P2N6 904 aa7.9□□□□□ -1.14
SCFD1-210ENST00000553693 PTPRAP18433 802 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 CDC27P30260 824 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 CEP120Q8N960 986 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 TP53INP1Q96A56 240 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 SSBP4Q9BWG4 385 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-210ENST00000553693 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 CNTN3Q9P232 1028 aa7.89□□□□□ -1.15
SCFD1-210ENST00000553693 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 C1orf127Q8N9H9 656 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 WFDC12Q8WWY7 111 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 ANO2Q9NQ90 1003 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 SALL4Q9UJQ4 1053 aa7.88□□□□□ -1.15
SCFD1-210ENST00000553693 A6NHS1 94 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 FZD6O60353 706 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 ICMTO60725 284 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 PHACTR2O75167 634 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 GJD3Q8N144 294 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 RETREG2Q8NC44 543 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
SCFD1-210ENST00000553693 H3BRB1 525 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 TNFRSF21O75509 655 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 EDN3P14138 238 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 NOS3P29474 1203 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 IREB2P48200 963 aaKnown RBP7.86□□□□□ -1.15
SCFD1-210ENST00000553693 GLYCTKQ8IVS8 523 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 CHRDQ9H2X0 955 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 TUT1Q9H6E5 874 aaKnown RBP7.86□□□□□ -1.15
SCFD1-210ENST00000553693 AKTIPQ9H8T0 292 aa7.86□□□□□ -1.15
SCFD1-210ENST00000553693 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
SCFD1-210ENST00000553693 CABP4P57796 275 aa7.85□□□□□ -1.15
SCFD1-210ENST00000553693 ADAM19Q9H013 955 aa7.85□□□□□ -1.15
SCFD1-210ENST00000553693 DZANK1Q9NVP4 752 aa7.85□□□□□ -1.15
SCFD1-210ENST00000553693 PDE2AO00408 941 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-210ENST00000553693 TMEM130Q8N3G9 435 aa7.84□□□□□ -1.15
SCFD1-210ENST00000553693 KLHL23Q8NBE8 558 aa7.84□□□□□ -1.15
SCFD1-210ENST00000553693 POP1Q99575 1024 aaKnown RBP7.84□□□□□ -1.15
SCFD1-210ENST00000553693 CCDC87Q9NVE4 849 aa7.84□□□□□ -1.15
SCFD1-210ENST00000553693 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-210ENST00000553693 H3BRJ5 948 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 FSCN2O14926 492 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 EREGO14944 169 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 EPHA1P21709 976 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 CD68P34810 354 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-210ENST00000553693 SERPINB4P48594 390 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 WNT8BQ93098 351 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 PCMTD2Q9NV79 361 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
SCFD1-210ENST00000553693 NDUFB5O43674 189 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 ACPPP15309 386 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-210ENST00000553693 CDC25BP30305 580 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 PIP4K2BP78356 416 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 TMEM102Q8N9M5 508 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-210ENST00000553693 GALNT11Q8NCW6 608 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 KRTAP4-11Q9BYQ6 195 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
SCFD1-210ENST00000553693 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-210ENST00000553693 IRAK1P51617 712 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 Q6ZS46 218 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
SCFD1-210ENST00000553693 CCER1Q8TC90 406 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-210ENST00000553693 MEGF10Q96KG7 1140 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 OSMRQ99650 979 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 CARD10Q9BWT7 1032 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 SH2B1Q9NRF2 756 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-210ENST00000553693 RNF114Q9Y508 228 aa7.81□□□□□ -1.16
SCFD1-210ENST00000553693 NFKBIEO00221 500 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 NEFLP07196 543 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 TXNDC2Q86VQ3 553 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 DZIP1LQ8IYY4 767 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms