RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PDE1AP54750 535 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
CHD8-204ENST00000553622 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 MPNDQ8N594 471 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 GPR101Q96P66 508 aaPredicted RBP11.95□□□□□ -0.5
CHD8-204ENST00000553622 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 ERC2O15083 957 aa11.94□□□□□ -0.5
CHD8-204ENST00000553622 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
CHD8-204ENST00000553622 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
CHD8-204ENST00000553622 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
CHD8-204ENST00000553622 TTC41PQ6P2S7 1318 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 MAP4K4O95819 1239 aaPredicted RBP11.93□□□□□ -0.5
CHD8-204ENST00000553622 FGFR2P21802 821 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 KLRK1P26718 216 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 GYG1P46976 350 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 CCDC93Q567U6 631 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CHD8-204ENST00000553622 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
CHD8-204ENST00000553622 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 AOX1Q06278 1338 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 SALL3Q9BXA9 1300 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 G3V3G9 751 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
CHD8-204ENST00000553622 GLRX3O76003 335 aaKnown RBP11.92□□□□□ -0.5
CHD8-204ENST00000553622 PHKA1P46020 1223 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 BCAMP50895 628 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 CC2D2BQ6DHV5 1058 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 DNAJC2Q99543 621 aaKnown RBP11.92□□□□□ -0.5
CHD8-204ENST00000553622 BOLA2Q9H3K6 86 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
CHD8-204ENST00000553622 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
CHD8-204ENST00000553622 IQSEC3Q9UPP2 1182 aaPredicted RBP11.92□□□□□ -0.5
CHD8-204ENST00000553622 SOGA3Q5TF21 947 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 EYA3Q99504 573 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
CHD8-204ENST00000553622 UQCRFS1P1P0C7P4 283 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 ATP5JP18859 108 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
CHD8-204ENST00000553622 FKBP4Q02790 459 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD8-204ENST00000553622 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 TXNRD3Q86VQ6 643 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 RTKN2Q8IZC4 609 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 ZC3H12CQ9C0D7 883 aaKnown RBP11.9□□□□□ -0.5
CHD8-204ENST00000553622 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.5
CHD8-204ENST00000553622 SBF1O95248 1867 aa11.89□□□□□ -0.51
CHD8-204ENST00000553622 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
CHD8-204ENST00000553622 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
CHD8-204ENST00000553622 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
CHD8-204ENST00000553622 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
CHD8-204ENST00000553622 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
CHD8-204ENST00000553622 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
CHD8-204ENST00000553622 GOLIM4O00461 696 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 ARID4AP29374 1257 aaPredicted RBP11.88□□□□□ -0.51
CHD8-204ENST00000553622 MCAMP43121 646 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 SCARF1Q14162 830 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
CHD8-204ENST00000553622 HAUS7Q99871 368 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 ZNF277Q9NRM2 450 aaPredicted RBP11.88□□□□□ -0.51
CHD8-204ENST00000553622 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
CHD8-204ENST00000553622 SDSP20132 328 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 AOC3Q16853 763 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 PSME4Q14997 1843 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 MYH2Q9UKX2 1941 aa11.87□□□□□ -0.51
CHD8-204ENST00000553622 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 ZAP70P43403 619 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 RASSF7Q02833 373 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms