RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
NEDD1-205ENST00000553609 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
NEDD1-205ENST00000553609 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
NEDD1-205ENST00000553609 GNAI1P63096 354 aa18.34■□□□□ 0.53
NEDD1-205ENST00000553609 ZNF296Q8WUU4 475 aaPredicted RBP18.34■□□□□ 0.53
NEDD1-205ENST00000553609 BSDC1Q9NW68 430 aaPredicted RBP18.34■□□□□ 0.53
NEDD1-205ENST00000553609 WNT10BO00744 389 aa18.33■□□□□ 0.52
NEDD1-205ENST00000553609 APAF1O14727 1248 aa18.33■□□□□ 0.52
NEDD1-205ENST00000553609 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.52
NEDD1-205ENST00000553609 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
NEDD1-205ENST00000553609 GREM2Q9H772 168 aa18.33■□□□□ 0.52
NEDD1-205ENST00000553609 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
NEDD1-205ENST00000553609 TBC1D8O95759 1140 aa18.32■□□□□ 0.52
NEDD1-205ENST00000553609 TM4SF4P48230 202 aa18.32■□□□□ 0.52
NEDD1-205ENST00000553609 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
NEDD1-205ENST00000553609 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
NEDD1-205ENST00000553609 SPEF2Q9C093 1822 aa18.31■□□□□ 0.52
NEDD1-205ENST00000553609 DDX58O95786 925 aaKnown RBP18.31■□□□□ 0.52
NEDD1-205ENST00000553609 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
NEDD1-205ENST00000553609 STRIP1Q5VSL9 837 aa18.31■□□□□ 0.52
NEDD1-205ENST00000553609 ZBED3Q96IU2 234 aaPredicted RBP18.31■□□□□ 0.52
NEDD1-205ENST00000553609 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 MYH3P11055 1940 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 GPR25O00155 361 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 SASH1O94885 1247 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 KLRK1P26718 216 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
NEDD1-205ENST00000553609 PKN2Q16513 984 aaKnown RBP18.3■□□□□ 0.52
NEDD1-205ENST00000553609 PRPF38BQ5VTL8 546 aaKnown RBP18.3■□□□□ 0.52
NEDD1-205ENST00000553609 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
NEDD1-205ENST00000553609 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
NEDD1-205ENST00000553609 COA1Q9GZY4 146 aa18.29■□□□□ 0.52
NEDD1-205ENST00000553609 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
NEDD1-205ENST00000553609 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
NEDD1-205ENST00000553609 PTPN12Q05209 780 aaKnown RBP18.28■□□□□ 0.52
NEDD1-205ENST00000553609 LDLRAD1Q5T700 205 aa18.28■□□□□ 0.52
NEDD1-205ENST00000553609 OGFOD1Q8N543 542 aa18.28■□□□□ 0.52
NEDD1-205ENST00000553609 PRKRIP1Q9H875 184 aaPredicted RBP18.28■□□□□ 0.52
NEDD1-205ENST00000553609 HDAC9Q9UKV0 1011 aa18.28■□□□□ 0.52
NEDD1-205ENST00000553609 MKI67P46013 3256 aaKnown RBP18.28■□□□□ 0.52
NEDD1-205ENST00000553609 H7C1W4 665 aa18.27■□□□□ 0.52
NEDD1-205ENST00000553609 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
NEDD1-205ENST00000553609 TTLL12Q14166 644 aaPredicted RBP18.27■□□□□ 0.52
NEDD1-205ENST00000553609 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.52
NEDD1-205ENST00000553609 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 MMP14P50281 582 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 CASP7P55210 303 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 FBXO46Q6PJ61 603 aaPredicted RBP18.26■□□□□ 0.51
NEDD1-205ENST00000553609 G2E3Q7L622 706 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
NEDD1-205ENST00000553609 ZNF804BA4D1E1 1349 aa18.25■□□□□ 0.51
NEDD1-205ENST00000553609 IRS2Q9Y4H2 1338 aa18.25■□□□□ 0.51
NEDD1-205ENST00000553609 SREBF2Q12772 1141 aa18.25■□□□□ 0.51
NEDD1-205ENST00000553609 KIAA0825Q8IV33 1275 aa18.25■□□□□ 0.51
NEDD1-205ENST00000553609 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
NEDD1-205ENST00000553609 CENPFP49454 3210 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 NF2P35240 595 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 SPRYD7Q5W111 196 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 APOBEC3FQ8IUX4 373 aaKnown RBP18.24■□□□□ 0.51
NEDD1-205ENST00000553609 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
NEDD1-205ENST00000553609 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 FZD1Q9UP38 647 aa18.24■□□□□ 0.51
NEDD1-205ENST00000553609 COL1A1P02452 1464 aaPredicted RBP18.24■□□□□ 0.51
NEDD1-205ENST00000553609 FKTNO75072 461 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 ITGA6P23229 1130 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
NEDD1-205ENST00000553609 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 PRKG1Q13976 671 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 CERS5Q8N5B7 392 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 BRCA2P51587 3418 aa18.23■□□□□ 0.51
NEDD1-205ENST00000553609 LAMB1P07942 1786 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 CSF1RP07333 972 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 GTF2IP78347 998 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 GCKRQ14397 625 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 MAP3K11Q16584 847 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
NEDD1-205ENST00000553609 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
NEDD1-205ENST00000553609 SNAP23O00161 211 aa18.21■□□□□ 0.51
NEDD1-205ENST00000553609 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
NEDD1-205ENST00000553609 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
NEDD1-205ENST00000553609 PCDHAC2Q9Y5I4 1007 aa18.21■□□□□ 0.51
NEDD1-205ENST00000553609 CHRNDQ07001 517 aa18.2■□□□□ 0.5
NEDD1-205ENST00000553609 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
NEDD1-205ENST00000553609 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
NEDD1-205ENST00000553609 DEFB129Q9H1M3 183 aa18.2■□□□□ 0.5
NEDD1-205ENST00000553609 AOX1Q06278 1338 aa18.2■□□□□ 0.5
NEDD1-205ENST00000553609 A0A1B0GUL6 1792 aa18.19■□□□□ 0.5
NEDD1-205ENST00000553609 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
NEDD1-205ENST00000553609 IGF2BP3O00425 579 aaKnown RBP eCLIP18.18■□□□□ 0.5
NEDD1-205ENST00000553609 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
NEDD1-205ENST00000553609 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
NEDD1-205ENST00000553609 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
NEDD1-205ENST00000553609 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms