RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 PTPN12Q05209 780 aaKnown RBP10.38□□□□□ -0.75
PCNX1-203ENST00000553272 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 SREBF2Q12772 1141 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 LDLRAD1Q5T700 205 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 HYPKQ9NX55 129 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 XDHP47989 1333 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
PCNX1-203ENST00000553272 DACT2Q5SW24 774 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 SPRYD7Q5W111 196 aa10.37□□□□□ -0.75
PCNX1-203ENST00000553272 PDE8AO60658 829 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 ALDH1A1P00352 501 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 PCCAP05165 728 aaPredicted RBP10.36□□□□□ -0.75
PCNX1-203ENST00000553272 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
PCNX1-203ENST00000553272 NF2P35240 595 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 CCDC152Q4G0S7 254 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
PCNX1-203ENST00000553272 CHRDL2Q6WN34 429 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 MXD3Q9BW11 206 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 TRIM35Q9UPQ4 493 aa10.36□□□□□ -0.75
PCNX1-203ENST00000553272 H0YGN5 161 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
PCNX1-203ENST00000553272 MMP14P50281 582 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 INHBEP58166 350 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 PRKG1Q13976 671 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 STRIP1Q5VSL9 837 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 ARMC9Q7Z3E5 817 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 ANKRD18AQ8IVF6 992 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 CCDC191Q8NCU4 936 aa10.35□□□□□ -0.75
PCNX1-203ENST00000553272 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 DUSP27Q5VZP5 1158 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-203ENST00000553272 ZBED3Q96IU2 234 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-203ENST00000553272 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-203ENST00000553272 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
PCNX1-203ENST00000553272 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
PCNX1-203ENST00000553272 MED23Q9ULK4 1368 aa10.34□□□□□ -0.75
PCNX1-203ENST00000553272 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 LAMA3Q16787 3333 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 MANSC4A6NHS7 340 aaPredicted RBP10.33□□□□□ -0.76
PCNX1-203ENST00000553272 IGF2BP3O00425 579 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCNX1-203ENST00000553272 SASH1O94885 1247 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 CD99L2Q8TCZ2 262 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 MYD88Q99836 296 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 COA1Q9GZY4 146 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 BSDC1Q9NW68 430 aaPredicted RBP10.33□□□□□ -0.76
PCNX1-203ENST00000553272 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
PCNX1-203ENST00000553272 FZD1Q9UP38 647 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 PTPN22Q9Y2R2 807 aa10.33□□□□□ -0.76
PCNX1-203ENST00000553272 ZBTB48P10074 688 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-203ENST00000553272 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
PCNX1-203ENST00000553272 CAP1Q01518 475 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 APOBEC3FQ8IUX4 373 aaKnown RBP10.32□□□□□ -0.76
PCNX1-203ENST00000553272 ARMC5Q96C12 935 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-203ENST00000553272 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
PCNX1-203ENST00000553272 UNC80Q8N2C7 3258 aa10.32□□□□□ -0.76
PCNX1-203ENST00000553272 MYH3P11055 1940 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 CTSWP56202 376 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 TTLL5Q6EMB2 1281 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 CCDC146Q8IYE0 955 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 TTLL11Q8NHH1 800 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 ERO1AQ96HE7 468 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 WNK4Q96J92 1243 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 CLMNQ96JQ2 1002 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 CDC5LQ99459 802 aaKnown RBP10.31□□□□□ -0.76
PCNX1-203ENST00000553272 METTL22Q9BUU2 404 aaPredicted RBP10.31□□□□□ -0.76
PCNX1-203ENST00000553272 DEFB129Q9H1M3 183 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 MBIPQ9NS73 344 aa10.31□□□□□ -0.76
PCNX1-203ENST00000553272 COL1A1P02452 1464 aaPredicted RBP10.3□□□□□ -0.76
PCNX1-203ENST00000553272 UNCXA6NJT0 531 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 ZNF853P0CG23 659 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 KIAA0825Q8IV33 1275 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 FBXW7Q969H0 707 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 PTPN18Q99952 460 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 GREM2Q9H772 168 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 SSC5DA1L4H1 1573 aa10.3□□□□□ -0.76
PCNX1-203ENST00000553272 TESPA1A2RU30 521 aaPredicted RBP10.29□□□□□ -0.76
PCNX1-203ENST00000553272 KLRK1P26718 216 aa10.29□□□□□ -0.76
PCNX1-203ENST00000553272 GJA5P36382 358 aa10.29□□□□□ -0.76
PCNX1-203ENST00000553272 CRHR2Q13324 411 aa10.29□□□□□ -0.76
PCNX1-203ENST00000553272 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
PCNX1-203ENST00000553272 EFCC1Q9HA90 598 aa10.29□□□□□ -0.76
PCNX1-203ENST00000553272 PPP1R12BO60237 982 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms