RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
NPAS3-213ENST00000552874 EXOC6Q8TAG9 804 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
NPAS3-213ENST00000552874 SASH1O94885 1247 aa9.58□□□□□ -0.88
NPAS3-213ENST00000552874 IARSP41252 1262 aaKnown RBP9.58□□□□□ -0.88
NPAS3-213ENST00000552874 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
NPAS3-213ENST00000552874 MPNDQ8N594 471 aa9.58□□□□□ -0.88
NPAS3-213ENST00000552874 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
NPAS3-213ENST00000552874 HDAC5Q9UQL6 1122 aa9.58□□□□□ -0.88
NPAS3-213ENST00000552874 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
NPAS3-213ENST00000552874 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 YDJCA8MPS7 323 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 UFL1O94874 794 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 LMNB1P20700 586 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 AOC3Q16853 763 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
NPAS3-213ENST00000552874 LDHAL6AQ6ZMR3 332 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 ARHGAP27Q6ZUM4 889 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 RPAP2Q8IXW5 612 aaPredicted RBP9.57□□□□□ -0.88
NPAS3-213ENST00000552874 SIL1Q9H173 461 aa9.57□□□□□ -0.88
NPAS3-213ENST00000552874 ZNF804BA4D1E1 1349 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 DDX60LQ5H9U9 1706 aaKnown RBP9.56□□□□□ -0.88
NPAS3-213ENST00000552874 PAPPA2Q9BXP8 1791 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 TAF5LO75529 589 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 ATP2B4P23634 1241 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 IL15P40933 162 aaPredicted RBP9.56□□□□□ -0.88
NPAS3-213ENST00000552874 C9orf131Q5VYM1 1079 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
NPAS3-213ENST00000552874 MPHOSPH8Q99549 860 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 VPS33BQ9H267 617 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
NPAS3-213ENST00000552874 TRPM7Q96QT4 1865 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 FZD9O00144 591 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 PDE8BO95263 885 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
NPAS3-213ENST00000552874 AAMPQ13685 434 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 ANKRD2Q9GZV1 360 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 RNF181Q9P0P0 153 aa9.55□□□□□ -0.88
NPAS3-213ENST00000552874 NSFL1CQ9UNZ2 370 aaKnown RBP9.55□□□□□ -0.88
NPAS3-213ENST00000552874 PPIP5K2O43314 1243 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 TFCP2Q12800 502 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
NPAS3-213ENST00000552874 UBE4AQ14139 1066 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
NPAS3-213ENST00000552874 TAF7LQ5H9L4 462 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 SUPT20HQ8NEM7 779 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
NPAS3-213ENST00000552874 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 ANKIB1Q9P2G1 1089 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
NPAS3-213ENST00000552874 LAMB1P07942 1786 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 ECE2O60344 883 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 ADORA1P30542 326 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 FBXO33Q7Z6M2 555 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 FAM84BQ96KN1 310 aaPredicted RBP9.53□□□□□ -0.88
NPAS3-213ENST00000552874 DCTPP1Q9H773 170 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 GPR108Q9NPR9 543 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 SIPA1L1O43166 1804 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 SALL3Q9BXA9 1300 aa9.53□□□□□ -0.88
NPAS3-213ENST00000552874 OTOFQ9HC10 1997 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 C6orf229H3BNL8 230 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 IL1R1P14778 569 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 ATP2B3Q16720 1220 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 WASHC4Q2M389 1173 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 TNNI3KQ59H18 835 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 LARGE2Q8N3Y3 721 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 LPIN2Q92539 896 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 EYA3Q99504 573 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 DBNDD1Q9H9R9 158 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 KCNQ5Q9NR82 932 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 TLR7Q9NYK1 1049 aaKnown RBP9.52□□□□□ -0.89
NPAS3-213ENST00000552874 FPGT-TNNI3KV9GXZ4 949 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 CEP350Q5VT06 3117 aa9.52□□□□□ -0.89
NPAS3-213ENST00000552874 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 A0A1B0GUL7 405 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 POTECB2RU33 542 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 HMMRO75330 724 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 SURF6O75683 361 aaKnown RBP9.51□□□□□ -0.89
NPAS3-213ENST00000552874 GYG1P46976 350 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 SMC5Q8IY18 1101 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 TDRD7Q8NHU6 1098 aaKnown RBP9.51□□□□□ -0.89
NPAS3-213ENST00000552874 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 EAF2Q96CJ1 260 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-213ENST00000552874 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-213ENST00000552874 GMLQ99445 158 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
NPAS3-213ENST00000552874 ZNRF3Q9ULT6 936 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 PCNTO95613 3336 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 KDM2BQ8NHM5 1336 aa9.51□□□□□ -0.89
NPAS3-213ENST00000552874 GABBR2O75899 941 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 IGHDP01880 384 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 CENPBP07199 599 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms