RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CWC25Q9NXE8 425 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-217ENST00000552801 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-217ENST00000552801 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 APAF1O14727 1248 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-217ENST00000552801 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
TMEM116-217ENST00000552801 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 ANKRD18AQ8IVF6 992 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 TBC1D16Q8TBP0 767 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-217ENST00000552801 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-217ENST00000552801 PGAP2Q9UHJ9 254 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 THSD7BQ9C0I4 1608 aa11.17□□□□□ -0.62
TMEM116-217ENST00000552801 PDE8AO60658 829 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 GBA2Q9HCG7 927 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 POLLQ9UGP5 575 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 ZNF157P51786 506 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 RGMBQ6NW40 437 aa11.16□□□□□ -0.62
TMEM116-217ENST00000552801 PHAXQ9H814 394 aaKnown RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-217ENST00000552801 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
TMEM116-217ENST00000552801 POLR2AP24928 1970 aaKnown RBP11.15□□□□□ -0.63
TMEM116-217ENST00000552801 SHTN1A0MZ66 631 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 C7P10643 843 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 ATP2B4P23634 1241 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 METTL22Q9BUU2 404 aaPredicted RBP11.15□□□□□ -0.63
TMEM116-217ENST00000552801 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 GGA3Q9NZ52 723 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.63
TMEM116-217ENST00000552801 XDHP47989 1333 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 DGKZQ13574 1117 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-217ENST00000552801 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 AGBL3Q8NEM8 1001 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-217ENST00000552801 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
TMEM116-217ENST00000552801 CASP8AP2Q9UKL3 1982 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 STK25O00506 426 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
TMEM116-217ENST00000552801 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 NF2P35240 595 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 IGHMBP2P38935 993 aaKnown RBP11.13□□□□□ -0.63
TMEM116-217ENST00000552801 KCNJ4P48050 445 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-217ENST00000552801 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
TMEM116-217ENST00000552801 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-217ENST00000552801 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
TMEM116-217ENST00000552801 AKAP11Q9UKA4 1901 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 CTSWP56202 376 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 SCARF1Q14162 830 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 ANGEL2Q5VTE6 544 aaKnown RBP11.12□□□□□ -0.63
TMEM116-217ENST00000552801 KSR2Q6VAB6 950 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 C8orf58Q8NAV2 365 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 MYH3P11055 1940 aa11.12□□□□□ -0.63
TMEM116-217ENST00000552801 PI4KAP2A4QPH2 592 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 PI4KAP1Q8N8J0 262 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 MYOZ2Q9NPC6 264 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
TMEM116-217ENST00000552801 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 EGFRP00533 1210 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 KIF23Q02241 960 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-217ENST00000552801 IER5LQ5T953 404 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 SAGE1Q9NXZ1 904 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
TMEM116-217ENST00000552801 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 TRPA1O75762 1119 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 SEC24BO95487 1268 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 FKBP1BP68106 108 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 TWISTNBQ3B726 338 aaPredicted RBP11.09□□□□□ -0.63
TMEM116-217ENST00000552801 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 TSR2Q969E8 191 aaKnown RBP11.09□□□□□ -0.63
TMEM116-217ENST00000552801 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
TMEM116-217ENST00000552801 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 SCN9AQ15858 1988 aa11.09□□□□□ -0.63
TMEM116-217ENST00000552801 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
TMEM116-217ENST00000552801 PITPNM2Q9BZ72 1349 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms