RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 TRIM28Q13263 835 aaKnown RBP12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 TM6SF1Q9BZW5 370 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
TUBA1C-209ENST00000552448 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 AK2P54819 239 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 MPNDQ8N594 471 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 CNPY2Q9Y2B0 182 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 ATRNO75882 1429 aa12.93□□□□□ -0.34
TUBA1C-209ENST00000552448 PTGS1P23219 599 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 RUFY3Q7L099 469 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 AFF2P51816 1311 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 IGSF3O75054 1194 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 CREB3L3Q68CJ9 461 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 GIMAP6Q6P9H5 292 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 SPC24Q8NBT2 197 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 HAUS7Q99871 368 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
TUBA1C-209ENST00000552448 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 ELP1O95163 1332 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 EYA2O00167 538 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 CPA1P15085 419 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 CCDC186Q7Z3E2 898 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 PLA2G4DQ86XP0 818 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 C16orf45Q96MC5 204 aaPredicted RBP12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
TUBA1C-209ENST00000552448 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 AP5Z1O43299 807 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 CIAO1O76071 339 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 SIK1P57059 783 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 TEX35Q5T0J7 233 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 TDRD7Q8NHU6 1098 aaKnown RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 NUP98P52948 1817 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 A0A0G2JS52 829 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 SLC27A2O14975 620 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 SYT1P21579 422 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 CYP2C19P33261 490 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 ZNF75DP51815 510 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 DDX19AQ9NUU7 478 aaKnown RBP12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
TUBA1C-209ENST00000552448 BTAF1O14981 1849 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 TAF5LO75529 589 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 TIMM10P62072 90 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
TUBA1C-209ENST00000552448 ZNF609O15014 1411 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms