RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 MPNDQ8N594 471 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 SUPT20HQ8NEM7 779 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 NEUROD6Q96NK8 337 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 CCDC8Q9H0W5 538 aaPredicted RBP9.32□□□□□ -0.92
USP44-206ENST00000551837 DBNLQ9UJU6 430 aaKnown RBP9.32□□□□□ -0.92
USP44-206ENST00000551837 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
USP44-206ENST00000551837 LAMB2P55268 1798 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 SEMA3EO15041 775 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 TAF5LO75529 589 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 GPSM2P81274 684 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
USP44-206ENST00000551837 HELBQ8NG08 1087 aaPredicted RBP9.31□□□□□ -0.92
USP44-206ENST00000551837 TBC1D16Q8TBP0 767 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 FAM84BQ96KN1 310 aaPredicted RBP9.31□□□□□ -0.92
USP44-206ENST00000551837 DBNDD2Q9BQY9 259 aa9.31□□□□□ -0.92
USP44-206ENST00000551837 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
USP44-206ENST00000551837 DALRD3Q5D0E6 543 aaKnown RBP9.3□□□□□ -0.92
USP44-206ENST00000551837 CCDC102BQ68D86 513 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 TMED8Q6PL24 325 aaPredicted RBP9.3□□□□□ -0.92
USP44-206ENST00000551837 PSMD1Q99460 953 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 EYA3Q99504 573 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 SYT17Q9BSW7 474 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 POLLQ9UGP5 575 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 GGA1Q9UJY5 639 aa9.3□□□□□ -0.92
USP44-206ENST00000551837 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 IL1R1P14778 569 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 HIBADHP31937 336 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 CCDC93Q567U6 631 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 TTC22Q5TAA0 569 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 DPP8Q6V1X1 898 aaPredicted RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 TDRD7Q8NHU6 1098 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 OTUD7AQ8TE49 926 aaPredicted RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 HAUS7Q99871 368 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 ZC3H12CQ9C0D7 883 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
USP44-206ENST00000551837 GNL3LQ9NVN8 582 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 PDS5AQ29RF7 1337 aaKnown RBP9.29□□□□□ -0.92
USP44-206ENST00000551837 LRP5O75197 1615 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 KCNJ4P48050 445 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 RGS3P49796 1198 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
USP44-206ENST00000551837 WASHC4Q2M389 1173 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 EVI5LQ96CN4 794 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 MYH3P11055 1940 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 SNED1Q8TER0 1413 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 KIF13BQ9NQT8 1826 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 LTBP3Q9NS15 1303 aa9.28□□□□□ -0.92
USP44-206ENST00000551837 MED23Q9ULK4 1368 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
USP44-206ENST00000551837 WTIPA6NIX2 430 aaPredicted RBP9.27□□□□□ -0.93
USP44-206ENST00000551837 C21orf2O43822 256 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 BCAMP50895 628 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 FKBP4Q02790 459 aaKnown RBP eCLIP9.27□□□□□ -0.93
USP44-206ENST00000551837 TTC39AQ5SRH9 613 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 TXNRD3Q86VQ6 643 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
USP44-206ENST00000551837 FHDC1Q9C0D6 1143 aaPredicted RBP9.27□□□□□ -0.93
USP44-206ENST00000551837 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 CD209Q9NNX6 404 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
USP44-206ENST00000551837 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 ANKRD31Q8N7Z5 1873 aa9.27□□□□□ -0.93
USP44-206ENST00000551837 ZNF609O15014 1411 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 C6orf229H3BNL8 230 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 SNAP23O00161 211 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 GSPT1P15170 499 aaKnown RBP9.26□□□□□ -0.93
USP44-206ENST00000551837 SDSP20132 328 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 ADORA1P30542 326 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 PHKA1P46020 1223 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
USP44-206ENST00000551837 KIAA2012Q0VF49 1180 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
USP44-206ENST00000551837 ZNF804AQ7Z570 1209 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 SPATA5Q8NB90 893 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 MRIQ9BWK5 157 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 FAM205AQ6ZU69 1335 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
USP44-206ENST00000551837 HIP1O00291 1037 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 EPB41L2O43491 1005 aaKnown RBP9.25□□□□□ -0.93
USP44-206ENST00000551837 UFL1O94874 794 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
USP44-206ENST00000551837 MCAMP43121 646 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 GYG1P46976 350 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 MMP14P50281 582 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 LHX8Q68G74 356 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 SKAP1Q86WV1 359 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 VPS37DQ86XT2 251 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 KBTBD3Q8NAB2 608 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 WDR66Q8TBY9 1149 aa9.25□□□□□ -0.93
USP44-206ENST00000551837 PPP1R1BQ9UD71 204 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms