RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 FZD9O00144 591 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 YY1P25490 414 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 ATP2B3Q16720 1220 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 DCAF8Q5TAQ9 597 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 ZNRF3Q9ULT6 936 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 ZNF541Q9H0D2 1346 aa23.24■■□□□ 1.31
CTDSP2-207ENST00000551594 APBB1O00213 710 aa23.23■■□□□ 1.31
CTDSP2-207ENST00000551594 GYG1P46976 350 aa23.23■■□□□ 1.31
CTDSP2-207ENST00000551594 C15orf52Q6ZUT6 534 aaKnown RBP23.23■■□□□ 1.31
CTDSP2-207ENST00000551594 SCN9AQ15858 1988 aa23.23■■□□□ 1.31
CTDSP2-207ENST00000551594 TIMM10P62072 90 aa23.22■■□□□ 1.31
CTDSP2-207ENST00000551594 AAMPQ13685 434 aa23.22■■□□□ 1.31
CTDSP2-207ENST00000551594 LPIN2Q92539 896 aa23.22■■□□□ 1.31
CTDSP2-207ENST00000551594 FAM84BQ96KN1 310 aaPredicted RBP23.22■■□□□ 1.31
CTDSP2-207ENST00000551594 RAD17O75943 681 aa23.21■■□□□ 1.31
CTDSP2-207ENST00000551594 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
CTDSP2-207ENST00000551594 SLC5A1P13866 664 aa23.21■■□□□ 1.31
CTDSP2-207ENST00000551594 ADORA1P30542 326 aa23.21■■□□□ 1.31
CTDSP2-207ENST00000551594 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
CTDSP2-207ENST00000551594 ZC3H4Q9UPT8 1303 aaKnown RBP23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 BCAMP50895 628 aa23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 CXCL9Q07325 125 aa23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 COA1Q9GZY4 146 aa23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 CD209Q9NNX6 404 aa23.2■■□□□ 1.3
CTDSP2-207ENST00000551594 A0A1B0GUL7 405 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 HSP90AB4PQ58FF6 505 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 ZNF804AQ7Z570 1209 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 FBXO33Q7Z6M2 555 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 NEUROD6Q96NK8 337 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 DCTPP1Q9H773 170 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 AKAP2Q9Y2D5 859 aa23.19■■□□□ 1.3
CTDSP2-207ENST00000551594 PODNQ7Z5L7 613 aa23.18■■□□□ 1.3
CTDSP2-207ENST00000551594 RHPN1Q8TCX5 695 aa23.18■■□□□ 1.3
CTDSP2-207ENST00000551594 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
CTDSP2-207ENST00000551594 IL1RAPL2Q9NP60 686 aa23.18■■□□□ 1.3
CTDSP2-207ENST00000551594 GJA3Q9Y6H8 435 aa23.18■■□□□ 1.3
CTDSP2-207ENST00000551594 ZNF609O15014 1411 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 GLTPD2A6NH11 291 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 CIAPIN1Q6FI81 312 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 DPY19L2Q6NUT2 758 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 IQSEC3Q9UPP2 1182 aaPredicted RBP23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
CTDSP2-207ENST00000551594 RAB11FIP3O75154 756 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 XAGE2Q96GT9 111 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 GPR108Q9NPR9 543 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 ARAP2Q8WZ64 1704 aa23.16■■□□□ 1.3
CTDSP2-207ENST00000551594 PSMD14O00487 310 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 IGHDP01880 384 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 IL1R1P14778 569 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 HDAC1Q13547 482 aaPredicted RBP23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 FBXW7Q969H0 707 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 EAF2Q96CJ1 260 aaPredicted RBP23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 KIF1BPQ96EK5 621 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 JAG2Q9Y219 1238 aa23.15■■□□□ 1.3
CTDSP2-207ENST00000551594 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.29
CTDSP2-207ENST00000551594 TDRD7Q8NHU6 1098 aaKnown RBP23.14■■□□□ 1.29
CTDSP2-207ENST00000551594 MXD3Q9BW11 206 aa23.14■■□□□ 1.29
CTDSP2-207ENST00000551594 CCDC8Q9H0W5 538 aaPredicted RBP23.14■■□□□ 1.29
CTDSP2-207ENST00000551594 PSME4Q14997 1843 aa23.14■■□□□ 1.29
CTDSP2-207ENST00000551594 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 PHKA1P46020 1223 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 GTF2IP78347 998 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 TNIP1Q15025 636 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 GPC2Q8N158 579 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 DBNDD2Q9BQY9 259 aa23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 TLR7Q9NYK1 1049 aaKnown RBP23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 ZBTB12Q9Y330 459 aaPredicted RBP23.13■■□□□ 1.29
CTDSP2-207ENST00000551594 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
CTDSP2-207ENST00000551594 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
CTDSP2-207ENST00000551594 AACSQ86V21 672 aa23.12■■□□□ 1.29
CTDSP2-207ENST00000551594 LRRCC1Q9C099 1032 aa23.12■■□□□ 1.29
CTDSP2-207ENST00000551594 RWDD1Q9H446 243 aaPredicted RBP23.12■■□□□ 1.29
CTDSP2-207ENST00000551594 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 GMPSP49915 693 aaPredicted RBP23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 GORABQ5T7V8 394 aa23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 ZNF784Q8NCA9 323 aaPredicted RBP23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 DBNLQ9UJU6 430 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-207ENST00000551594 FRAT2O75474 233 aaPredicted RBP23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 NEFLP07196 543 aa23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 DACT2Q5SW24 774 aa23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 STRIP1Q5VSL9 837 aa23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 RRAGCQ9HB90 399 aa23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 NMRK2Q9NPI5 230 aa23.1■■□□□ 1.29
CTDSP2-207ENST00000551594 POTECB2RU33 542 aa23.09■■□□□ 1.29
CTDSP2-207ENST00000551594 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
CTDSP2-207ENST00000551594 RSBN1LQ6PCB5 846 aaPredicted RBP23.09■■□□□ 1.29
CTDSP2-207ENST00000551594 CLASRPQ8N2M8 674 aaKnown RBP23.09■■□□□ 1.29
CTDSP2-207ENST00000551594 MYH13Q9UKX3 1938 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms