RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	ZNF804A	Q7Z570	1209 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	REM2	Q8IYK8	340 aa	Predicted RBP	11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	CNNM1	Q9NRU3	951 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	CHMP3	Q9Y3E7	222 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	ZNF609	O15014	1411 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	CACNA1S	Q13698	1873 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551	MROH5	Q6ZUA9	1318 aa		11.34	□□□□□ -0.59
ATXN2-223	ENST00000551551		F6X3S4	739 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	MAP2K1	Q02750	393 aa	Predicted RBP	11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	TTLL5	Q6EMB2	1281 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	SULF1	Q8IWU6	871 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	MICALL2	Q8IY33	904 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	SSH1	Q8WYL5	1049 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	DBNDD1	Q9H9R9	158 aa		11.33	□□□□□ -0.6
ATXN2-223	ENST00000551551	YDJC	A8MPS7	323 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	GNAI3	P08754	354 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	MS4A1	P11836	297 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	MAP2K2	P36507	400 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	ZNF280A	P59817	542 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	FKBP1B	P68106	108 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	CHRND	Q07001	517 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	DOK7	Q18PE1	504 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	RABL6	Q3YEC7	729 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	CAVIN4	Q5BKX8	364 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	MAP1S	Q66K74	1059 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	BBX	Q8WY36	941 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	BEGAIN	Q9BUH8	593 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	PITPNM2	Q9BZ72	1349 aa		11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	DDX60	Q8IY21	1712 aa	Known RBP	11.32	□□□□□ -0.6
ATXN2-223	ENST00000551551	LAMB2	P55268	1798 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	RASSF10	A6NK89	507 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	CA12	O43570	354 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	MYO1B	O43795	1136 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	SASH1	O94885	1247 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	FAM161A	Q3B820	660 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	C2orf69	Q8N8R5	385 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	JARID2	Q92833	1246 aa	Predicted RBP	11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	AIDA	Q96BJ3	306 aa		11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	CHMP4B	Q9H444	224 aa	Known RBP	11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	ABT1	Q9ULW3	272 aa	Known RBP	11.31	□□□□□ -0.6
ATXN2-223	ENST00000551551	LRRC37A	A6NMS7	1700 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	UNCX	A6NJT0	531 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	UBTFL1	P0CB47	393 aa	Predicted RBP	11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	NF2	P35240	595 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	KRT26	Q7Z3Y9	468 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	VPS37D	Q86XT2	251 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	TBC1D22A	Q8WUA7	517 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	CCDC102A	Q96A19	550 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	USP44	Q9H0E7	712 aa		11.3	□□□□□ -0.6
ATXN2-223	ENST00000551551	IL1R1	P14778	569 aa		11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	RARS	P54136	660 aa	Known RBP	11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	KIF4B	Q2VIQ3	1234 aa		11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	MRI	Q9BWK5	157 aa		11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	CD209	Q9NNX6	404 aa		11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	NOB1	Q9ULX3	412 aa	Known RBP	11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	SUGT1	Q9Y2Z0	365 aa		11.29	□□□□□ -0.6
ATXN2-223	ENST00000551551	CNTNAP1	P78357	1384 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	PDE8B	O95263	885 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	IFIT1	P09914	478 aa	Known RBP	11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	POTEI	P0CG38	1075 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	POTEJ	P0CG39	1038 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	HIBADH	P31937	336 aa	Known RBP	11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	INTS3	Q68E01	1043 aa	Known RBP	11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	CDCA7L	Q96GN5	454 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	GML	Q99445	158 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	MYOZ2	Q9NPC6	264 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	GNL3L	Q9NVN8	582 aa	Known RBP	11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	RIPOR2	Q9Y4F9	1068 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	TLL2	Q9Y6L7	1015 aa		11.28	□□□□□ -0.6
ATXN2-223	ENST00000551551	MYH3	P11055	1940 aa		11.27	□□□□□ -0.6
ATXN2-223	ENST00000551551	FRAT2	O75474	233 aa	Predicted RBP	11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	CIAO1	O76071	339 aa		11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	CELF2	O95319	508 aa	Known RBP	11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	DACT2	Q5SW24	774 aa		11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	MTMR14	Q8NCE2	650 aa		11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	BICC1	Q9H694	974 aa	Known RBP	11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	PPP2R3B	Q9Y5P8	575 aa		11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	CEP350	Q5VT06	3117 aa		11.27	□□□□□ -0.61
ATXN2-223	ENST00000551551	IGSF3	O75054	1194 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	VASP	P50552	380 aa	Predicted RBP	11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	GTF2I	P78347	998 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	HDLBP	Q00341	1268 aa	Known RBP	11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	NOG	Q13253	232 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	TNFAIP1	Q13829	316 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	SCARF1	Q14162	830 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	METTL24	Q5JXM2	366 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	ATF7IP	Q6VMQ6	1270 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	SAMD7	Q7Z3H4	446 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	SAPCD2	Q86UD0	394 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	MIER1	Q8N108	512 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	HOOK2	Q96ED9	719 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	CEP126	Q9P2H0	1117 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	AKAP2	Q9Y2D5	859 aa		11.26	□□□□□ -0.61
ATXN2-223	ENST00000551551	IL15	P40933	162 aa	Predicted RBP	11.25	□□□□□ -0.61

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