RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 RASSF7Q02833 373 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 COL13A1Q5TAT6 717 aaPredicted RBP10.12□□□□□ -0.79
NPAS3-208ENST00000550662 ZNF468Q5VIY5 522 aaPredicted RBP10.12□□□□□ -0.79
NPAS3-208ENST00000550662 ZNF654Q8IZM8 581 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 C3orf58Q8NDZ4 430 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 TCF12Q99081 682 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 DZANK1Q9NVP4 752 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 GGT7Q9UJ14 662 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 TTF2Q9UNY4 1162 aaKnown RBP10.12□□□□□ -0.79
NPAS3-208ENST00000550662 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.12□□□□□ -0.79
NPAS3-208ENST00000550662 SIN3BO75182 1162 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 FCGRTP55899 365 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 GAS6Q14393 721 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 DRC1Q96MC2 740 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 NSUN5Q96P11 429 aaKnown RBP10.11□□□□□ -0.79
NPAS3-208ENST00000550662 OXCT2Q9BYC2 517 aaPredicted RBP10.11□□□□□ -0.79
NPAS3-208ENST00000550662 RBSNQ9H1K0 784 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 ABCB6Q9NP58 842 aa10.11□□□□□ -0.79
NPAS3-208ENST00000550662 DDX41Q9UJV9 622 aaKnown RBP10.11□□□□□ -0.79
NPAS3-208ENST00000550662 GPR25O00155 361 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 BMP4P12644 408 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 GNL2Q13823 731 aaKnown RBP10.1□□□□□ -0.79
NPAS3-208ENST00000550662 DTHD1Q6ZMT9 781 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 SYT9Q86SS6 491 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 TMEM151AQ8N4L1 468 aa10.1□□□□□ -0.79
NPAS3-208ENST00000550662 TMEM102Q8N9M5 508 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-208ENST00000550662 BHLHE41Q9C0J9 482 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-208ENST00000550662 GDF11O95390 407 aa10.09□□□□□ -0.79
NPAS3-208ENST00000550662 ADAMTS2O95450 1211 aa10.09□□□□□ -0.79
NPAS3-208ENST00000550662 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
NPAS3-208ENST00000550662 LYPD4Q6UWN0 246 aa10.09□□□□□ -0.79
NPAS3-208ENST00000550662 SLC43A3Q8NBI5 491 aa10.09□□□□□ -0.79
NPAS3-208ENST00000550662 DNAJB12Q9NXW2 375 aaKnown RBP10.09□□□□□ -0.79
NPAS3-208ENST00000550662 GHRHP01286 108 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 RLBP1P12271 317 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 PWP1Q13610 501 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 ERMP1Q7Z2K6 904 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 PBX4Q9BYU1 374 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 UBE2OQ9C0C9 1292 aaKnown RBP10.08□□□□□ -0.8
NPAS3-208ENST00000550662 CEP44Q9C0F1 390 aa10.08□□□□□ -0.8
NPAS3-208ENST00000550662 NSFL1CQ9UNZ2 370 aaKnown RBP10.08□□□□□ -0.8
NPAS3-208ENST00000550662 ZBTB42B2RXF5 422 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 MX2P20592 715 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 ITPKAP23677 461 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 TNFRSF25Q93038 417 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 NXPE3Q969Y0 559 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 RSRP1Q9BUV0 290 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
NPAS3-208ENST00000550662 RNF225M0QZC1 329 aaPredicted RBP10.06□□□□□ -0.8
NPAS3-208ENST00000550662 NFKBIEO00221 500 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 PDE2AO00408 941 aaPredicted RBP10.06□□□□□ -0.8
NPAS3-208ENST00000550662 C2CD2LO14523 706 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 ARAFP10398 606 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 ACPPP15309 386 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 ZNF394Q53GI3 561 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 RPS26P11Q5JNZ5 115 aaPredicted RBP10.06□□□□□ -0.8
NPAS3-208ENST00000550662 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 ACBD3Q9H3P7 528 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 IGFLR1Q9H665 355 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 CAPN10Q9HC96 672 aa10.06□□□□□ -0.8
NPAS3-208ENST00000550662 SRA1Q9HD15 236 aaKnown RBP10.06□□□□□ -0.8
NPAS3-208ENST00000550662 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPAS3-208ENST00000550662 MAP2K3P46734 347 aa10.05□□□□□ -0.8
NPAS3-208ENST00000550662 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-208ENST00000550662 CCDC85BQ15834 202 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-208ENST00000550662 A0A096LPE4 126 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 LOC100996750A0A140TA64 210 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 A0A1W2PPZ6 126 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 J3QW42 95 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 CELA2BP08218 269 aaPredicted RBP10.04□□□□□ -0.8
NPAS3-208ENST00000550662 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
NPAS3-208ENST00000550662 ADH6P28332 368 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 GRIA4P48058 902 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
NPAS3-208ENST00000550662 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 KRTAP4-6Q9BYQ5 205 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 RASSF4Q9H2L5 321 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 PCDHGB7Q9Y5F8 929 aa10.04□□□□□ -0.8
NPAS3-208ENST00000550662 ADARB2-AS1A8MUL3 147 aa10.03□□□□□ -0.8
NPAS3-208ENST00000550662 PCBP4P57723 403 aaKnown RBP10.03□□□□□ -0.8
NPAS3-208ENST00000550662 HFE2Q6ZVN8 426 aa10.03□□□□□ -0.8
NPAS3-208ENST00000550662 FAM35AQ86V20 835 aa10.03□□□□□ -0.8
NPAS3-208ENST00000550662 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
NPAS3-208ENST00000550662 SLC6A14Q9UN76 642 aa10.03□□□□□ -0.8
NPAS3-208ENST00000550662 TRPA1O75762 1119 aa10.02□□□□□ -0.81
NPAS3-208ENST00000550662 SPRED3Q2MJR0 410 aa10.02□□□□□ -0.81
NPAS3-208ENST00000550662 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
NPAS3-208ENST00000550662 ASAP3Q8TDY4 903 aa10.02□□□□□ -0.81
NPAS3-208ENST00000550662 UBXN4Q92575 508 aa10.02□□□□□ -0.81
NPAS3-208ENST00000550662 ADH7P40394 386 aa10.01□□□□□ -0.81
NPAS3-208ENST00000550662 ATP11AP98196 1134 aa10.01□□□□□ -0.81
NPAS3-208ENST00000550662 SUZ12Q15022 739 aaKnown RBP10.01□□□□□ -0.81
NPAS3-208ENST00000550662 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
NPAS3-208ENST00000550662 BSNDQ8WZ55 320 aa10.01□□□□□ -0.81
NPAS3-208ENST00000550662 PLD4Q96BZ4 506 aa10.01□□□□□ -0.81
NPAS3-208ENST00000550662 HHIPQ96QV1 700 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms