RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 NPATQ14207 1427 aa8.38□□□□□ -1.07
SCAF11-213ENST00000550629 WEE1P30291 646 aa8.38□□□□□ -1.07
SCAF11-213ENST00000550629 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
SCAF11-213ENST00000550629 CHSY3Q70JA7 882 aa8.38□□□□□ -1.07
SCAF11-213ENST00000550629 ZNF280CQ8ND82 737 aa8.38□□□□□ -1.07
SCAF11-213ENST00000550629 CEP152O94986 1710 aa8.37□□□□□ -1.07
SCAF11-213ENST00000550629 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
SCAF11-213ENST00000550629 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
SCAF11-213ENST00000550629 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
SCAF11-213ENST00000550629 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
SCAF11-213ENST00000550629 PTPRTO14522 1441 aa8.37□□□□□ -1.07
SCAF11-213ENST00000550629 DHX57Q6P158 1386 aaKnown RBP8.36□□□□□ -1.07
SCAF11-213ENST00000550629 CLSPNQ9HAW4 1339 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 C1QTNF9BB2RNN3 333 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 ATG7O95352 703 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 STK32AQ8WU08 396 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 PTPRMP28827 1452 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 E9PCH4 1651 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 NOS1P29475 1434 aa8.36□□□□□ -1.07
SCAF11-213ENST00000550629 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 TRPM2O94759 1503 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 RIMS1Q86UR5 1692 aaKnown RBP8.35□□□□□ -1.07
SCAF11-213ENST00000550629 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
SCAF11-213ENST00000550629 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
SCAF11-213ENST00000550629 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-213ENST00000550629 C3P01024 1663 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 RTN1Q16799 776 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 SLC52A1Q9NWF4 448 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 ANKRD30BQ9BXX2 1392 aa8.34□□□□□ -1.07
SCAF11-213ENST00000550629 PREX1Q8TCU6 1659 aa8.34□□□□□ -1.08
SCAF11-213ENST00000550629 PLA2R1Q13018 1463 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 NLRP1Q9C000 1473 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 FOXO3O43524 673 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 CHRNA4P43681 627 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 TYRO3Q06418 890 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-213ENST00000550629 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 TNRQ92752 1358 aa8.33□□□□□ -1.08
SCAF11-213ENST00000550629 SPHKAPQ2M3C7 1700 aa8.32□□□□□ -1.08
SCAF11-213ENST00000550629 PRMT3O60678 531 aa8.32□□□□□ -1.08
SCAF11-213ENST00000550629 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
SCAF11-213ENST00000550629 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
SCAF11-213ENST00000550629 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
SCAF11-213ENST00000550629 PIK3C2BO00750 1634 aa8.32□□□□□ -1.08
SCAF11-213ENST00000550629 SYNMO15061 1565 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 CCDC144AA2RUR9 1427 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 HIF1AQ16665 826 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 SLC30A3Q99726 388 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 NEURL4Q96JN8 1562 aa8.31□□□□□ -1.08
SCAF11-213ENST00000550629 KDM5AP29375 1690 aaKnown RBP8.3□□□□□ -1.08
SCAF11-213ENST00000550629 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-213ENST00000550629 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-213ENST00000550629 OCLNQ16625 522 aa8.3□□□□□ -1.08
SCAF11-213ENST00000550629 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-213ENST00000550629 KLK14Q9P0G3 267 aa8.3□□□□□ -1.08
SCAF11-213ENST00000550629 KCNQ4P56696 695 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 DGKZQ13574 1117 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 SYT9Q86SS6 491 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
SCAF11-213ENST00000550629 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 A2ML1A8K2U0 1454 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
SCAF11-213ENST00000550629 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 ALAS2P22557 587 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 IER5Q5VY09 327 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 TRIM11Q96F44 468 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 CLTCL1P53675 1640 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 ADGRB3O60242 1522 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 UHRF1BP1Q6BDS2 1440 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
SCAF11-213ENST00000550629 ZNF142P52746 1687 aaPredicted RBP8.27□□□□□ -1.08
SCAF11-213ENST00000550629 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-213ENST00000550629 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-213ENST00000550629 IDI1Q13907 227 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 DOC2BQ14184 412 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 RAB44Q7Z6P3 723 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-213ENST00000550629 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 MYO19Q96H55 970 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCAF11-213ENST00000550629 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms