RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 ATP10DQ9P241 1426 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 ZBTB7CA1YPR0 619 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 APBB1O00213 710 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 TRAK2O60296 914 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 USP17L8P0C7I0 530 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 GSPT1P15170 499 aaKnown RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 EIF2S2P20042 333 aaKnown RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 GMPRP36959 345 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 EIF4A1P60842 406 aaKnown RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 CTC1Q2NKJ3 1217 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 KRT28Q7Z3Y7 464 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 ARHGEF25Q86VW2 580 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 ANP32BQ92688 251 aaKnown RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 USP26Q9BXU7 913 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 TRIM34Q9BYJ4 488 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 HYPKQ9NX55 129 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 OVOS2A0A0G2JMS6 1433 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 NCOA3Q9Y6Q9 1424 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 NEXNQ0ZGT2 675 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 NBPF6Q5VWK0 638 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 G2E3Q7L622 706 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 CNTROBQ8N137 903 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 Q8N3U1 123 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 SNIP1Q8TAD8 396 aaKnown RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 RUFY2Q8WXA3 655 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 NBPF4Q96M43 638 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 OCSTAMPQ9BR26 566 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 SENP2Q9HC62 589 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 C9orf78Q9NZ63 289 aaPredicted RBP5.29□□□□□ -1.56
CCDC59-204ENST00000550589 SPG7Q9UQ90 795 aa5.29□□□□□ -1.56
CCDC59-204ENST00000550589 SETD1BQ9UPS6 1966 aaKnown RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 PEAK1Q9H792 1746 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 FMN2Q9NZ56 1722 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 DLG5Q8TDM6 1919 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 SURF6O75683 361 aaKnown RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 PDIA4P13667 645 aaKnown RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 GSK3AP49840 483 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 OS9Q13438 667 aaPredicted RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 RAB3GAP1Q15042 981 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 KIAA1211Q6ZU35 1233 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 SH3RF1Q7Z6J0 888 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 CLASRPQ8N2M8 674 aaKnown RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 SSH3Q8TE77 659 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 ANKRD24Q8TF21 1146 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 GJD4Q96KN9 370 aaPredicted RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 USP44Q9H0E7 712 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 STAP2Q9UGK3 403 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 LRRFIP2Q9Y608 721 aaKnown RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 IBTKQ9P2D0 1353 aaPredicted RBP5.28□□□□□ -1.56
CCDC59-204ENST00000550589 PIK3C2AO00443 1686 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 NPHP3Q7Z494 1330 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 USP54Q70EL1 1684 aa5.28□□□□□ -1.56
CCDC59-204ENST00000550589 PI4KAP2A4QPH2 592 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 HIP1O00291 1037 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 RNMTO43148 476 aaKnown RBP5.27□□□□□ -1.57
CCDC59-204ENST00000550589 SRGAP3O43295 1099 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 TATP17735 454 aaPredicted RBP5.27□□□□□ -1.57
CCDC59-204ENST00000550589 MRE11P49959 708 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 TMEM259Q4ZIN3 620 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 KSR2Q6VAB6 950 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 SH3BP5LQ7L8J4 393 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 C16orf71Q8IYS4 520 aaPredicted RBP5.27□□□□□ -1.57
CCDC59-204ENST00000550589 CYP4X1Q8N118 509 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 PI4KAP1Q8N8J0 262 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 RILPL2Q969X0 211 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 EXOC6BQ9Y2D4 811 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 TTC41PQ6P2S7 1318 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 SMARCA5O60264 1052 aaPredicted RBP5.27□□□□□ -1.57
CCDC59-204ENST00000550589 GLRX3O76003 335 aaKnown RBP5.27□□□□□ -1.57
CCDC59-204ENST00000550589 MPRIPQ6WCQ1 1025 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 CLEC17AQ6ZS10 378 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 PPP1R42Q7Z4L9 355 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 IFNL2Q8IZJ0 200 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 TTC5Q8N0Z6 440 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 USHBP1Q8N6Y0 703 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 SNRKQ9NRH2 765 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 CHPF2Q9P2E5 772 aa5.27□□□□□ -1.57
CCDC59-204ENST00000550589 PNMA6EA0A0J9YXQ4 647 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 AXIN1O15169 862 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 GPR37L1O60883 481 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 GIGYF1O75420 1035 aaPredicted RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 AVPP01185 164 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 DDIT3P35638 169 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 MTX1Q13505 466 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 BEND3Q5T5X7 828 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 LARP1Q6PKG0 1096 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 NPAS3Q8IXF0 933 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 EHBP1Q8NDI1 1231 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 LINS1Q8NG48 757 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 RHPN1Q8TCX5 695 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 TNPO1Q92973 898 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 INTS4Q96HW7 963 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 ORAI2Q96SN7 254 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 KIF2CQ99661 725 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 ESYT1Q9BSJ8 1104 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 ANO2Q9NQ90 1003 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms