RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 SLFN5Q08AF3 891 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 ITPK1Q13572 414 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 DIXDC1Q155Q3 683 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
DEPDC4-209ENST00000550587 SMIM5Q71RC9 77 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 MAP10Q9P2G4 905 aa8□□□□□ -1.13
DEPDC4-209ENST00000550587 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
DEPDC4-209ENST00000550587 A0A0G2JLW4 131 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 E9PSI1 815 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 PTCD1O75127 700 aaKnown RBP7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 TOMM70O94826 608 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 NNTQ13423 1086 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 NCAPD2Q15021 1401 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 TNS4Q8IZW8 715 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 ZBTB3Q9H5J0 574 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 PIM2Q9P1W9 311 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 IL16Q14005 1332 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 CNTNAP4Q9C0A0 1308 aa7.99□□□□□ -1.13
DEPDC4-209ENST00000550587 ADCY9O60503 1353 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 TOGARAM1Q9Y4F4 1720 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 LMOD3Q0VAK6 560 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 COL13A1Q5TAT6 717 aaPredicted RBP7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 AMIGO3Q86WK7 504 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 KDM2BQ8NHM5 1336 aa7.98□□□□□ -1.13
DEPDC4-209ENST00000550587 HTATSF1O43719 755 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 GYS1P13807 737 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 DPEP1P16444 411 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 VEGFBP49765 207 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 CALD1Q05682 793 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 DALRD3Q5D0E6 543 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 MPNDQ8N594 471 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 NFATC2IPQ8NCF5 419 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 ZFP42Q96MM3 310 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
DEPDC4-209ENST00000550587 DLG5Q8TDM6 1919 aa7.96□□□□□ -1.13
DEPDC4-209ENST00000550587 CRKLP46109 303 aaKnown RBP7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 ARID5BQ14865 1188 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 QPCTQ16769 361 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 MTHFSDQ2M296 383 aaKnown RBP7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 TSC1Q92574 1164 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 MYH16Q9H6N6 1097 aa7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 CICQ96RK0 1608 aaPredicted RBP7.96□□□□□ -1.14
DEPDC4-209ENST00000550587 PXDNLA1KZ92 1463 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 TIMP2P16035 220 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 WDR4P57081 412 aaKnown RBP7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 PDE4DQ08499 809 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 PRPF38BQ5VTL8 546 aaKnown RBP7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 MYSM1Q5VVJ2 828 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 STK17AQ9UEE5 414 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 ZNF831Q5JPB2 1677 aa7.95□□□□□ -1.14
DEPDC4-209ENST00000550587 GNAT3A8MTJ3 354 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 ZNF853P0CG23 659 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 GNAI1P63096 354 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 FSTL1Q12841 308 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 TTC5Q8N0Z6 440 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 SLC4A9Q96Q91 983 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 PURBQ96QR8 312 aaKnown RBP7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 RNF181Q9P0P0 153 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 USP42Q9H9J4 1324 aaKnown RBP7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 N4BP2Q86UW6 1770 aaPredicted RBP7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 C10orf71Q711Q0 1435 aa7.94□□□□□ -1.14
DEPDC4-209ENST00000550587 C4AP0C0L4 1744 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 NPHP1O15259 732 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 STARD3NLO95772 234 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 ADH1CP00326 375 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 CT47B1P0C2W7 299 aaPredicted RBP7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 GMPRP36959 345 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 MRPL14Q6P1L8 145 aaKnown RBP7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 CDK15Q96Q40 435 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 SLC24A3Q9HC58 644 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 NMRK2Q9NPI5 230 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 IFT57Q9NWB7 429 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 RCAN3Q9UKA8 241 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 KIF13BQ9NQT8 1826 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
DEPDC4-209ENST00000550587 A0A087WZG4 1122 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 H0YIN7 160 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 CHL1O00533 1208 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 AGERQ15109 404 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 TEX13AQ9BXU3 409 aaPredicted RBP7.92□□□□□ -1.14
DEPDC4-209ENST00000550587 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms