RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 LAMB1P07942 1786 aa11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 LRRC37AA6NMS7 1700 aa11.07□□□□□ -0.64
SMARCD1-207ENST00000549526 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
SMARCD1-207ENST00000549526 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
SMARCD1-207ENST00000549526 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
SMARCD1-207ENST00000549526 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
SMARCD1-207ENST00000549526 LAMA2P24043 3122 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 WNT10BO00744 389 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 PPP1R12BO60237 982 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 CCL5P13501 91 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 TDHQ8IZJ6 230 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 GMLQ99445 158 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 PANK3Q9H999 370 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 IRS2Q9Y4H2 1338 aa11.06□□□□□ -0.64
SMARCD1-207ENST00000549526 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 GNRH1P01148 92 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 PRMT2P55345 433 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 GUCD1Q96NT3 240 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 PSME4Q14997 1843 aa11.05□□□□□ -0.64
SMARCD1-207ENST00000549526 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 GRK4P32298 578 aa11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 U2AF1L4Q8WU68 220 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 CELF1Q92879 486 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 MUC3AQ02505 3323 aa11.04□□□□□ -0.64
SMARCD1-207ENST00000549526 WDHD1O75717 1129 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 TFRCP02786 760 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 GJA5P36382 358 aa11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 RAET1EQ8TD07 263 aa11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 ZMYND8Q9ULU4 1186 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 TTC28Q96AY4 2481 aa11.03□□□□□ -0.64
SMARCD1-207ENST00000549526 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 UFL1O94874 794 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 SASH1O94885 1247 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 SGPL1O95470 568 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 UBXN2AP68543 259 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 MAP3K12Q12852 859 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 MCM10Q7L590 875 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 C7orf61Q8IZ16 206 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 RIPOR2Q9Y4F9 1068 aa11.02□□□□□ -0.65
SMARCD1-207ENST00000549526 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 SYN1P17600 705 aa11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 IREB2P48200 963 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 SH3TC1Q8TE82 1336 aa11.01□□□□□ -0.65
SMARCD1-207ENST00000549526 HOXD10P28358 340 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 MAGEA10P43363 369 aaPredicted RBP11□□□□□ -0.65
SMARCD1-207ENST00000549526 NLRP10Q86W26 655 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 FBXW7Q969H0 707 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 ZNF428Q96B54 188 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 OPTNQ96CV9 577 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 PAWRQ96IZ0 340 aaKnown RBP11□□□□□ -0.65
SMARCD1-207ENST00000549526 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 PHACTR3Q96KR7 559 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 MXD3Q9BW11 206 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 GGA1Q9UJY5 639 aa11□□□□□ -0.65
SMARCD1-207ENST00000549526 CCL15-CCL14A0A0B4J2E2 113 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 TLR2O60603 784 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 USP2O75604 605 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 PSMC4P43686 418 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 RPS8P62241 208 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 CCL15Q16663 113 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 BRI3BPQ8WY22 251 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 ELP3Q9H9T3 547 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 PODXL2Q9NZ53 605 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 SRRDQ9UH36 339 aa10.99□□□□□ -0.65
SMARCD1-207ENST00000549526 FMNL1O95466 1100 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-207ENST00000549526 GTF2A2P52657 109 aa10.98□□□□□ -0.65
SMARCD1-207ENST00000549526 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
SMARCD1-207ENST00000549526 TAF7Q15545 349 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms