RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 E7EWF7 191 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 SARM1Q6SZW1 724 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 SH3TC1Q8TE82 1336 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 CAVIN2O95810 425 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 SKILP12757 684 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
RAPGEF3-218ENST00000548919 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 CASP7P55210 303 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 MRFAP1L1Q96HT8 127 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 RFX7Q2KHR2 1363 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 CTAGE5O15320 804 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 PAXBP1Q9Y5B6 917 aa16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 V9GYY5 206 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF3-218ENST00000548919 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 SALL1Q9NSC2 1324 aa16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 FOXO4P98177 505 aa16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 RAB11FIP4Q86YS3 637 aa16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 ZNF396Q96N95 335 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 MAST3O60307 1309 aa16.54■□□□□ 0.24
RAPGEF3-218ENST00000548919 MEGF6O75095 1541 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 CCZ1BP86790 482 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 CCZ1P86791 482 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 HELLSQ9NRZ9 838 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 HAND2P61296 217 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
RAPGEF3-218ENST00000548919 M0R2C6 588 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 CYP27B1O15528 508 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 NDUFA8P51970 172 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
RAPGEF3-218ENST00000548919 PTPN14Q15678 1187 aa16.52■□□□□ 0.23
RAPGEF3-218ENST00000548919 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.23
RAPGEF3-218ENST00000548919 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.23
RAPGEF3-218ENST00000548919 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.23
RAPGEF3-218ENST00000548919 CLIC4Q9Y696 253 aa16.52■□□□□ 0.23
RAPGEF3-218ENST00000548919 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 DPCR1Q3MIW9 517 aa16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF3-218ENST00000548919 BIN1O00499 593 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 NBPF14Q5TI25 921 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 OSBP2Q969R2 916 aa16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
RAPGEF3-218ENST00000548919 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 SYCP1Q15431 976 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 NEMFO60524 1076 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 FEZ1Q99689 392 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 H7C1W4 665 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms