RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GGA1Q9UJY5 639 aa35.16■■■■□ 3.22
BRF1-213ENST00000548421 ATP5JP18859 108 aa35.15■■■■□ 3.22
BRF1-213ENST00000548421 WTIPA6NIX2 430 aaPredicted RBP35.14■■■■□ 3.22
BRF1-213ENST00000548421 GSPT1P15170 499 aaKnown RBP35.14■■■■□ 3.22
BRF1-213ENST00000548421 C7orf43Q8WVR3 580 aa35.14■■■■□ 3.22
BRF1-213ENST00000548421 UFL1O94874 794 aa35.13■■■■□ 3.21
BRF1-213ENST00000548421 TTC39AQ5SRH9 613 aa35.13■■■■□ 3.21
BRF1-213ENST00000548421 CC2D2BQ6DHV5 1058 aa35.13■■■■□ 3.21
BRF1-213ENST00000548421 OLFM4Q6UX06 510 aa35.13■■■■□ 3.21
BRF1-213ENST00000548421 MPNDQ8N594 471 aa35.13■■■■□ 3.21
BRF1-213ENST00000548421 DUOX1Q9NRD9 1551 aa35.12■■■■□ 3.21
BRF1-213ENST00000548421 AK9Q5TCS8 1911 aa35.11■■■■□ 3.21
BRF1-213ENST00000548421 CCDC102BQ68D86 513 aa35.11■■■■□ 3.21
BRF1-213ENST00000548421 DPP8Q6V1X1 898 aaPredicted RBP35.1■■■■□ 3.21
BRF1-213ENST00000548421 TBC1D16Q8TBP0 767 aa35.1■■■■□ 3.21
BRF1-213ENST00000548421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.1■■■■□ 3.21
BRF1-213ENST00000548421 ZNF219Q9P2Y4 722 aaPredicted RBP35.1■■■■□ 3.21
BRF1-213ENST00000548421 CAVIN4Q5BKX8 364 aa35.09■■■■□ 3.21
BRF1-213ENST00000548421 DALRD3Q5D0E6 543 aaKnown RBP35.09■■■■□ 3.21
BRF1-213ENST00000548421 ZNF512BQ96KM6 892 aaPredicted RBP35.09■■■■□ 3.21
BRF1-213ENST00000548421 PHKA1P46020 1223 aa35.09■■■■□ 3.21
BRF1-213ENST00000548421 C15orf52Q6ZUT6 534 aaKnown RBP35.09■■■■□ 3.21
BRF1-213ENST00000548421 BOLA2Q9H3K6 86 aa35.09■■■■□ 3.21
BRF1-213ENST00000548421 POLLQ9UGP5 575 aa35.09■■■■□ 3.21
BRF1-213ENST00000548421 IRS2Q9Y4H2 1338 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 SRCAPQ6ZRS2 3230 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 C21orf2O43822 256 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 KLRK1P26718 216 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 GRIPAP1Q4V328 841 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 NLGN2Q8NFZ4 835 aa35.08■■■■□ 3.21
BRF1-213ENST00000548421 SNED1Q8TER0 1413 aa35.07■■■■□ 3.21
BRF1-213ENST00000548421 AKAP11Q9UKA4 1901 aa35.07■■■■□ 3.21
BRF1-213ENST00000548421 C6orf229H3BNL8 230 aa35.07■■■■□ 3.2
BRF1-213ENST00000548421 UQCRFS1P1P0C7P4 283 aa35.07■■■■□ 3.2
BRF1-213ENST00000548421 GYG1P46976 350 aa35.07■■■■□ 3.2
BRF1-213ENST00000548421 BCAMP50895 628 aa35.07■■■■□ 3.2
BRF1-213ENST00000548421 FHDC1Q9C0D6 1143 aaPredicted RBP35.07■■■■□ 3.2
BRF1-213ENST00000548421 GOLGB1Q14789 3259 aaKnown RBP35.06■■■■□ 3.2
BRF1-213ENST00000548421 ARID4AP29374 1257 aaPredicted RBP35.06■■■■□ 3.2
BRF1-213ENST00000548421 VPS37DQ86XT2 251 aa35.06■■■■□ 3.2
BRF1-213ENST00000548421 FAM84BQ96KN1 310 aaPredicted RBP35.06■■■■□ 3.2
BRF1-213ENST00000548421 MED23Q9ULK4 1368 aa35.06■■■■□ 3.2
BRF1-213ENST00000548421 MYH13Q9UKX3 1938 aa35.06■■■■□ 3.2
BRF1-213ENST00000548421 CCDC93Q567U6 631 aa35.05■■■■□ 3.2
BRF1-213ENST00000548421 SOGA3Q5TF21 947 aa35.05■■■■□ 3.2
BRF1-213ENST00000548421 HAUS7Q99871 368 aa35.05■■■■□ 3.2
BRF1-213ENST00000548421 TRIM6-TRIM34B2RNG4 842 aa35.04■■■■□ 3.2
BRF1-213ENST00000548421 SDSP20132 328 aa35.04■■■■□ 3.2
BRF1-213ENST00000548421 FBXO33Q7Z6M2 555 aa35.04■■■■□ 3.2
BRF1-213ENST00000548421 GNL3LQ9NVN8 582 aaKnown RBP35.04■■■■□ 3.2
BRF1-213ENST00000548421 TXNRD3Q86VQ6 643 aa35.03■■■■□ 3.2
BRF1-213ENST00000548421 GPR101Q96P66 508 aaPredicted RBP35.03■■■■□ 3.2
BRF1-213ENST00000548421 ARFGEF1Q9Y6D6 1849 aa35.03■■■■□ 3.2
BRF1-213ENST00000548421 MAP4K4O95819 1239 aaPredicted RBP35.03■■■■□ 3.2
BRF1-213ENST00000548421 HIBADHP31937 336 aaKnown RBP35.03■■■■□ 3.2
BRF1-213ENST00000548421 RTKN2Q8IZC4 609 aa35.02■■■■□ 3.2
BRF1-213ENST00000548421 CNTROBQ8N137 903 aa35.02■■■■□ 3.2
BRF1-213ENST00000548421 DNAJC2Q99543 621 aaKnown RBP35.02■■■■□ 3.2
BRF1-213ENST00000548421 RTFDC1Q9BY42 306 aaPredicted RBP35.02■■■■□ 3.2
BRF1-213ENST00000548421 MCAMP43121 646 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 SCARF1Q14162 830 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 ZNF804AQ7Z570 1209 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 RILPL2Q969X0 211 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 EYA3Q99504 573 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 WWC3Q9ULE0 1092 aa35.01■■■■□ 3.19
BRF1-213ENST00000548421 EVI5LQ96CN4 794 aa34.99■■■■□ 3.19
BRF1-213ENST00000548421 RASGRF1Q13972 1273 aa34.98■■■■□ 3.19
BRF1-213ENST00000548421 SUPT20HQ8NEM7 779 aa34.98■■■■□ 3.19
BRF1-213ENST00000548421 BCS1LQ9Y276 419 aa34.98■■■■□ 3.19
BRF1-213ENST00000548421 FER1L6Q2WGJ9 1857 aa34.98■■■■□ 3.19
BRF1-213ENST00000548421 ZBTB22O15209 634 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 SYT17Q9BSW7 474 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 ZC3H12CQ9C0D7 883 aaKnown RBP34.97■■■■□ 3.19
BRF1-213ENST00000548421 PAG1Q9NWQ8 432 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 NDUFB9Q9Y6M9 179 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 SEMA3EO15041 775 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 FKBP4Q02790 459 aaKnown RBP eCLIP34.97■■■■□ 3.19
BRF1-213ENST00000548421 WASHC4Q2M389 1173 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 SPATA5Q8NB90 893 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 PSMD1Q99460 953 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 SNRKQ9NRH2 765 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 HMG20BQ9P0W2 317 aa34.97■■■■□ 3.19
BRF1-213ENST00000548421 ZAP70P43403 619 aa34.95■■■■□ 3.19
BRF1-213ENST00000548421 PI16Q6UXB8 463 aa34.95■■■■□ 3.19
BRF1-213ENST00000548421 EDC3Q96F86 508 aaKnown RBP34.95■■■■□ 3.19
BRF1-213ENST00000548421 GOLIM4O00461 696 aa34.94■■■■□ 3.18
BRF1-213ENST00000548421 RIMBP2O15034 1052 aa34.94■■■■□ 3.18
BRF1-213ENST00000548421 DENND2AQ9ULE3 1009 aa34.94■■■■□ 3.18
BRF1-213ENST00000548421 IQSEC3Q9UPP2 1182 aaPredicted RBP34.94■■■■□ 3.18
BRF1-213ENST00000548421 FRAT2O75474 233 aaPredicted RBP34.93■■■■□ 3.18
BRF1-213ENST00000548421 COL1A1P02452 1464 aaPredicted RBP34.92■■■■□ 3.18
BRF1-213ENST00000548421 CDC45O75419 566 aa34.92■■■■□ 3.18
BRF1-213ENST00000548421 CD209Q9NNX6 404 aa34.92■■■■□ 3.18
BRF1-213ENST00000548421 PDS5AQ29RF7 1337 aaKnown RBP34.92■■■■□ 3.18
BRF1-213ENST00000548421 TDRD7Q8NHU6 1098 aaKnown RBP34.91■■■■□ 3.18
BRF1-213ENST00000548421 COA1Q9GZY4 146 aa34.91■■■■□ 3.18
BRF1-213ENST00000548421 IL1R1P14778 569 aa34.9■■■■□ 3.18
BRF1-213ENST00000548421 TTF1Q15361 905 aaPredicted RBP34.9■■■■□ 3.18
BRF1-213ENST00000548421 C8orf34Q49A92 452 aa34.9■■■■□ 3.18
BRF1-213ENST00000548421 FSD1Q9BTV5 496 aa34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms