RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 AKT1S1Q96B36 256 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 C8orf37Q96NL8 207 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-206ENST00000548283 KCNQ2O43526 872 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 CHMLP26374 656 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 KIF6Q6ZMV9 814 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 NGLY1Q96IV0 654 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 TAF1P21675 1872 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 CTSWP56202 376 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 FAM196AQ6ZSG2 479 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 FBXL16Q8N461 479 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 HAUS7Q99871 368 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 RNF216Q9NWF9 866 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 ZMYM6O95789 1325 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 SH3TC1Q8TE82 1336 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 PDE8AO60658 829 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 TNNI3KQ59H18 835 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 CLEC17AQ6ZS10 378 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 IPO4Q8TEX9 1081 aaKnown RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 EAF2Q96CJ1 260 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-206ENST00000548283 FPGT-TNNI3KV9GXZ4 949 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 ZNF804BA4D1E1 1349 aa8.75□□□□□ -1.01
TMEM116-206ENST00000548283 RPAP1Q9BWH6 1393 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 GLRX3O76003 335 aaKnown RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 RBM6P78332 1123 aaKnown RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 C9orf131Q5VYM1 1079 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 EYA2O00167 538 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 MCCP23508 829 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 TM4SF1P30408 202 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 ECHDC1Q9NTX5 307 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 G3BP2Q9UN86 482 aaKnown RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 EXOC6BQ9Y2D4 811 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 SSFA2P28290 1259 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 ATP6V1AP38606 617 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 DZIP3Q86Y13 1208 aaKnown RBP8.74□□□□□ -1.01
TMEM116-206ENST00000548283 ESYT1Q9BSJ8 1104 aa8.74□□□□□ -1.01
TMEM116-206ENST00000548283 RRP9O43818 475 aaKnown RBP8.73□□□□□ -1.01
TMEM116-206ENST00000548283 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 MROH5Q6ZUA9 1318 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 TCHHQ07283 1943 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 GREB1LQ9C091 1923 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-206ENST00000548283 PROM2Q8N271 834 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 LSG1Q9H089 658 aaKnown RBP8.73□□□□□ -1.01
TMEM116-206ENST00000548283 SGSM2O43147 1006 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 POLD1P28340 1107 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 SUSD4Q5VX71 490 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 GPATCH3Q96I76 525 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
TMEM116-206ENST00000548283 SH3BP5O60239 455 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 UBE3BQ7Z3V4 1068 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 DBNLQ9UJU6 430 aaKnown RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 HSPA4P34932 840 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 RGS3P49796 1198 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 MKRN4PQ13434 485 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 AMIGO3Q86WK7 504 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 CREBRFQ8IUR6 639 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 NUTM2BA6NNL0 878 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 NUTM2EB1AL46 878 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 NUTM2AQ8IVF1 878 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 C22orf23Q9BZE7 217 aa8.72□□□□□ -1.01
TMEM116-206ENST00000548283 QTRT2Q9H974 415 aaKnown RBP8.72□□□□□ -1.01
TMEM116-206ENST00000548283 HIP1O00291 1037 aa8.71□□□□□ -1.01
TMEM116-206ENST00000548283 ERC2O15083 957 aa8.71□□□□□ -1.01
TMEM116-206ENST00000548283 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.01
TMEM116-206ENST00000548283 COL1A1P02452 1464 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-206ENST00000548283 MCM6Q14566 821 aa8.71□□□□□ -1.02
TMEM116-206ENST00000548283 LMBR1LQ6UX01 489 aa8.71□□□□□ -1.02
TMEM116-206ENST00000548283 SERPINA10Q9UK55 444 aa8.71□□□□□ -1.02
TMEM116-206ENST00000548283 AIMP1Q12904 312 aaKnown RBP8.71□□□□□ -1.02
TMEM116-206ENST00000548283 TM6SF1Q9BZW5 370 aa8.71□□□□□ -1.02
TMEM116-206ENST00000548283 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 ARMCX6Q7L4S7 300 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 KRT27Q7Z3Y8 459 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 CLASRPQ8N2M8 674 aaKnown RBP8.7□□□□□ -1.02
TMEM116-206ENST00000548283 IL25Q9H293 177 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 NID2Q14112 1375 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 UTP14AQ9BVJ6 771 aaKnown RBP8.7□□□□□ -1.02
TMEM116-206ENST00000548283 ZNF652Q9Y2D9 606 aa8.7□□□□□ -1.02
TMEM116-206ENST00000548283 HOXA10P31260 410 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-206ENST00000548283 MCM4P33991 863 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 TFCP2Q12800 502 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 PA2G4Q9UQ80 394 aaKnown RBP8.69□□□□□ -1.02
TMEM116-206ENST00000548283 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-206ENST00000548283 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 TTC14Q96N46 770 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 NYXQ9GZU5 481 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
TMEM116-206ENST00000548283 SALL1Q9NSC2 1324 aa8.69□□□□□ -1.02
TMEM116-206ENST00000548283 MPNDQ8N594 471 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms