RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SHKBP1Q8TBC3 707 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 KCNF1Q9H3M0 494 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 PIM2Q9P1W9 311 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 H3BRJ5 948 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 EIF4EBP3O60516 100 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 C16orf46Q6P387 395 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 FDX2Q6P4F2 183 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 FNBP4Q8N3X1 1017 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 FBXL18Q96ME1 805 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 METTL22Q9BUU2 404 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 PBX4Q9BYU1 374 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 LACRTQ9GZZ8 138 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 ADAM19Q9H013 955 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 ATG3Q9NT62 314 aa5.36□□□□□ -1.55
DEPDC4-204ENST00000547823 TM4SF5O14894 197 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 LGR5O75473 907 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 BMP3P12645 472 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 LMOD1P29536 600 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ARL4DP49703 201 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ATP11AP98196 1134 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 TXNDC11Q6PKC3 985 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ASIC4Q96FT7 647 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ABI2Q9NYB9 513 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 LEMD3Q9Y2U8 911 aa5.35□□□□□ -1.55
DEPDC4-204ENST00000547823 ACIN1Q9UKV3 1341 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 A6NJR5 290 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 ADAMTS4O75173 837 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 EPHA1P21709 976 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 FKBP5Q13451 457 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 PDE12Q6L8Q7 609 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 VSIG10LQ86VR7 867 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 NCAPG2Q86XI2 1143 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 ABTB2Q8N961 1025 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 FOXD4L4Q8WXT5 416 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 CARD10Q9BWT7 1032 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 KCNK4Q9NYG8 393 aa5.34□□□□□ -1.55
DEPDC4-204ENST00000547823 MEGF11A6BM72 1044 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 WDR64B1ANS9 1081 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 PRNPP04156 253 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 FOSL1P15407 271 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 PREPP48147 710 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 POU5F2Q8N7G0 328 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 RUSC1Q9BVN2 902 aa5.33□□□□□ -1.56
DEPDC4-204ENST00000547823 ZAP70P43403 619 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 ABI1Q8IZP0 508 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 CEP120Q8N960 986 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 AGBL5Q8NDL9 886 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 UBASH3BQ8TF42 649 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 YIPF2Q9BWQ6 316 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 OSBPL1AQ9BXW6 950 aa5.32□□□□□ -1.56
DEPDC4-204ENST00000547823 ARID1BQ8NFD5 2236 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 ADAM11O75078 769 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 RFX1P22670 979 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 MAP4P27816 1152 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 JAG1P78504 1218 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 MSMPQ1L6U9 139 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 COL13A1Q5TAT6 717 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 KLHDC7BQ96G42 594 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 SUGCTQ9HAC7 445 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 CYP4F12Q9HCS2 524 aa5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 NOVA2Q9UNW9 492 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-204ENST00000547823 CDC25BP30305 580 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 C19orf57Q0VDD7 668 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 ELOAQ14241 798 aaKnown RBP5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 OGFOD2Q6N063 350 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 PAOXQ6QHF9 649 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 CBLL1Q75N03 491 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 MFSD14AQ96MC6 490 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 SH2B1Q9NRF2 756 aaPredicted RBP5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 BSDC1Q9NW68 430 aaPredicted RBP5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 CCDC39Q9UFE4 941 aa5.3□□□□□ -1.56
DEPDC4-204ENST00000547823 TNFRSF10BO14763 440 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 PCSK2P16519 638 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 OCLNQ16625 522 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 SMG8Q8ND04 991 aaKnown RBP5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 PMEPA1Q969W9 287 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 CLUAP1Q96AJ1 413 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 POP1Q99575 1024 aaKnown RBP5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 STIM2Q9P246 746 aa5.29□□□□□ -1.56
DEPDC4-204ENST00000547823 DDX3YO15523 660 aaKnown RBP5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 PRMT3O60678 531 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 ITGB5P18084 799 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 RXRBP28702 533 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 NLRP12P59046 1061 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 ZNF438Q7Z4V0 828 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 TP53INP2Q8IXH6 220 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 PRIMPOLQ96LW4 560 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 ZMYND15Q9H091 742 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 SAP130Q9H0E3 1048 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 SOX17Q9H6I2 414 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 ELP3Q9H9T3 547 aa5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 CXXC1Q9P0U4 656 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-204ENST00000547823 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms